Curation and analysis of skeletal muscle single-cell data across species
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Mar 5, 2024 - Jupyter Notebook
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transcriptomics-data-integration
Here are 5 public repositories matching this topic...
List of online databases and resources for Mycobacterium Tuberculosis
list integration genomics curated computational-biology drug-discovery proteomics omics transcriptomics proteomics-data tuberculosis proteomics-datasets proteomics-data-integration mycobacterium-tuberculosis transcriptomics-datasets transcriptomics-data-integration transcriptomics-data genomics-data genomics-data-sets mycobacterium
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Mar 14, 2019
This repository contains an analysis pipeline for processing and visualizing single-cell RNA sequencing (scRNA-seq) data using the Seurat package in R. The dataset used is the Peripheral Blood Mononuclear Cells (PBMC) 3K dataset from 10X Genomics.
bioinformatics quality-control integration computational-biology dimensionality-reduction scrna-seq immunology r-package marker-genes differential-expression normalization seurat data-analysis-in-r transcriptomics-data-integration cell-type-annotation cell-clustering multimodal-integration
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Mar 10, 2025 - R
Github repo for the 2024 CeNGEN manuscript detailing our work analyzing gene expression data from FACS sorted C. elegans neurons, integrating data from both bulk and single cell RNA-seq methods
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Mar 5, 2025 - R
Nanopore directRNA (hopefully cDNA too ;)) workflow with many transcript reconstruction alternatives
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Apr 17, 2025 - HTML
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