Materials for #NGSchool2019 - Machine Learning for Biomedicine

You will find here the materials for workshops, hackathons and lectures at the #NGSchool2019, together with installation directions and tips for running the software necessary for participation in the NGSchool2019.

General instructions

Conda

Put the Conda instructions here.

Colab

Google Colab is an online service in which you can run jupyter notebooks (and even use some limited GPU!) It comes with some preloaded libraries which makes it easier to teach and run tutorials without having to spend too much time on fixing dependencies etc.

Workshops

Intro to Linux

Intro to R

Intro to Python

The whole workshop will be executed in the Jupyter notebook.

Requirements:

• python3
• Jupyter

See Conda instructions with ENV_NAME set to into_to_Python.

Bayesian Inference

Natural language processing

Reinforcement Learning

Deep learning methods for genomics

Deep Generative Models for dimensionality reduction

Tree based methods

Hackathons