Updated Cookbook SWOT Chapter

_quarto.yml

@@ -152,14 +152,20 @@ website:
                         href: notebooks/datasets/SWOT_PIXC_Area_localmachine.ipynb  
                       - text: "PIXC Phase Unwrap"
                         href: notebooks/datasets/SWOT_PIXC_PhaseUnwrap_localmachine.ipynb
-                      - section: "Raster Multifile"
+                      - section: "SWOT Raster Multifile Access & Quality Flag Application"
                         contents:
                           - text: "Cloud"
                             href: notebooks/datasets/SWOT_Raster_Notebook_cloud.ipynb
                           - text: "Local"
                             href: notebooks/datasets/SWOT_Raster_Notebook_local.ipynb
                       - text: "Quality Flags"
                         href: notebooks/datasets/SWOT_quality_flag_demo.ipynb
+                      - section: "Longitudinal Profiles"
+                        contents:
+                          - text: "Cloud"
+                            href: notebooks/DataStories/SWOTHR_Science_Application.ipynb
+                          - text: "Local"
+                            href: notebooks/DataStories/SWOTHR_Science_Application_localmachine.ipynb
                   - section: "River Profiles Data Story"
                     contents:
                           - text: "Cloud"
@@ -168,12 +174,10 @@ website:
                             href: notebooks/DataStories/SWOTHR_Science_Application_localmachine.ipynb
                   - section: "GIS Workflows"
                     contents:
-                      - text: "StoryMap"
-                        href: https://storymaps.arcgis.com/stories/4a9184e813e540248040069580f6a54c
-                      - text: "Shapefile Exploration"
-                        href: notebooks/GIS/SWOT_GISshapefiles.ipynb
-                      - text: "Datetime Conversion"
-                        href: notebooks/GIS/SWOT_datetime_GIS.ipynb
+                      - text: "Tutorials"
+                        href: quarto_text/SWOT.html#Tutorials
+                      - text: "Services"
+                        href: quarto_text/SWOT.html#Services
                   - section: "Transform Data"
                     contents:
                       - text: "Datum Conversion"
@@ -189,19 +193,31 @@ website:
                           - text: "Windows"
                             href: notebooks/GIS/GDAL_NetCDF_GeoTIFF.ipynb
                   - text: "Tools"
-                    href: quarto_text/SWOT.html#tools
-                  - section: "SWORD of Science (SoS) Discharge"
+                    href: quarto_text/SWOT.html#Tools
+                  - section: "Additional Resources"
                     contents:
-                      - text: "Exploring river discharge"
-                        href: notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE.ipynb
-                      - text: "Exploring river discharge and gauge data"
-                        href: notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_gauges.ipynb
-                      - text: "Plotting ALL river discharge algorithms"
-                        href: notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_gauges_plot_all.ipynb
-                      - text: "Visualizing river discharge"
-                        href: notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_visualize.ipynb
-          - href: quarto_text/GIS.qmd 
-            text: "GIS"
+                      - text: "Data Descriptions and Features"
+                        href: quarto_text/SWOT.html#Data Descriptions and Features
+                      - text: "Databases & Dashboards"
+                        href: quarto_text/SWOT.html#Databases & Dashboards
+                      - text: "Videos"
+                        href: quarto_text/SWOT.html#Videos
+                      - text: "SWOT Community GitHub Repository"
+                        href: quarto_text/SWOT.html#SWOT Community GitHub Repository
+                      - text: "Data in Action Stories"
+                        href: quarto_text/SWOT.html#Data in Action Stories
+                      - text: "Workshops and Webinars"
+                        href: quarto_text/SWOT.html#Workshops & Webinars  
+          - section: quarto_text/GIS.qmd 
+            contents:
+              - section: "NASA Earthdata (EGIS) Services"
+                href: notebooks/GIS/SWOT_Rivers_EGIS_Services.md
+              - text: "StoryMaps"
+                href: quarto_text/GIS.html#GIS StoryMaps of Select Datasets
+              - text: "GIS Walkthroughs"
+                href: quarto_text/GIS.html#GIS Walkthroughs
+              - text: "GIS Jupyter Notebook Tutorials"
+                href: quarto_text/GIS.html#GIS Jupyter Notebook Tutorials
           - section: quarto_text/CloudvsLocalWorkflows.qmd
             contents:
               - section: "Estuary Example"

quarto_text/GIS.qmd

@@ -3,12 +3,14 @@ title: GIS
 subtitle: StoryMaps and Tutorials using Geographic Information Systems (GIS)
 ---
 
-## [**NASA Earthdata GIS (EGIS)**](https://gis.earthdata.nasa.gov/portal/home/index.html)
-- [SWOT Level 2 River Single-Pass Vector Data Product GIS services](https://podaac.github.io/tutorials/notebooks/GIS/SWOT_Rivers_EGIS_Services.html)
+## **NASA Earthdata GIS (EGIS)**
+
+- SWOT HR Level 2 River Single-Pass Vector Data Product GIS services available via [NASA Earhtdata GIS (EGIS)](https://gis.earthdata.nasa.gov/portal/home/index.html) 
+- [SWOT Level 2 River Single-Pass Vector Data Product GIS services](../notebooks/GIS/SWOT_Rivers_EGIS_Services.md)
 - [SWOT Rivers EGIS Access Guide](../notebooks/GIS/SWOT_EGIS_access.ipynb)
 - [SWOT Rivers EGIS Python Guide](../notebooks/GIS/SWOT_EGIS_access_Python.ipynb)
 
-## GIS StoryMaps of Select Datasets:
+## **GIS StoryMaps of Select Datasets:**
 
 #### [**PO.DAAC GIS StoryMap Collection Page**](https://storymaps.arcgis.com/collections/413c17cba4b44be18e445c1caaf03fff)
 
@@ -17,11 +19,12 @@ subtitle: StoryMaps and Tutorials using Geographic Information Systems (GIS)
 - [Utilizing GRACE data over the Colorado River Basin](https://storymaps.arcgis.com/collections/413c17cba4b44be18e445c1caaf03fff?item=3)
 - [The Oceans & Melting Glaciers: OMG & GRACE](https://storymaps.arcgis.com/collections/413c17cba4b44be18e445c1caaf03fff?item=4)
 
-## GIS Walkthroughs
+## **GIS Walkthroughs**
+
 - [Mapping Sea Surface Temperature Anomalies in QGIS](../notebooks/GIS/MUR_SSTA_QGIS.md)
 - [Transform SWOT Datetime field for use in GIS](../notebooks/GIS/SWOT_datetime_GIS.ipynb)
 
-## GIS Jupyter Notebook Tutorials
+## **GIS Jupyter Notebook Tutorials**
 
 - [GIS SWOT shapefile exploration](../notebooks/GIS/SWOT_GISshapefiles.ipynb)
 - NetCDF to Geotiff Conversion: SWOT Data Example - [mac or Linux](../notebooks/GIS/Subscriber_nc_to_tif_SWOT.qmd) | [Windows](../notebooks/GIS/GDAL_NetCDF_GeoTIFF.ipynb)

quarto_text/SWOT.qmd

@@ -9,7 +9,7 @@ The Surface Water and Ocean Topography (SWOT) mission aims to provide valuable d
 
 ## SWOT Data Resources & Tutorials
 
-### **Search & Download**
+#### **Search & Download**
 
 #### **Via Graphical User Interface:**
 
@@ -138,27 +138,35 @@ In [Earthdata Search GUI](https://search.earthdata.nasa.gov/search):
 
 #### [Quality Flag Tutorial](../notebooks/datasets/SWOT_quality_flag_demo.ipynb) - Quality Flag Tips for all products, specifically demonstrates SSHA 8-bit quality flag application 
 
-### **Data Story**
+#### Retrieve SWOT attributes (WSE, width, slope) and plot a longitudinal profile along a river or over a basin [in the Cloud](https://podaac.github.io/tutorials/notebooks/DataStories/SWOTHR_Science_Application.html) or [on a local machine](https://podaac.github.io/tutorials/notebooks/DataStories/SWOTHR_Science_Application_localmachine.html)
+
+### **River Profiles Data Stories**
 
 #### SWOT Hydrology Science Workflow [in the Cloud](../notebooks/DataStories/SWOTHR_Science_Application.ipynb) or [on a local machine](../notebooks/DataStories/SWOTHR_Science_Application_localmachine.ipynb) - Retrieving SWOT attributes (WSE, width, slope) and plotting a longitudinal profile along a river or over a basin
 
 ### **GIS workflows**
 
-#### [SWOT: Through a GIS Lens StoryMap](https://storymaps.arcgis.com/stories/4a9184e813e540248040069580f6a54c)
+    #### **Tutorials**
+
+        - #### [SWOT: Through a GIS Lens StoryMap](https://storymaps.arcgis.com/stories/4a9184e813e540248040069580f6a54c)
+
+        - #### [Shapefile exploration](../notebooks/GIS/SWOT_GISshapefiles.ipynb)
+
+        - #### [Transform SWOT Datetime field for use in GIS Software](../notebooks/GIS/SWOT_datetime_GIS.ipynb)
 
-#### [Shapefile exploration](../notebooks/GIS/SWOT_GISshapefiles.ipynb)
+    #### **Services**
 
-#### [Transform SWOT Datetime field for use in GIS Software](../notebooks/GIS/SWOT_datetime_GIS.ipynb)
+        #### **NASA Earthdata GIS (EGIS)**
 
-### [**NASA Earthdata GIS (EGIS)**](https://gis.earthdata.nasa.gov/portal/home/index.html)
+        - #### SWOT HR Level 2 GIS services available via [NASA Earhtdata GIS (EGIS)](https://gis.earthdata.nasa.gov/portal/home/index.html) 
 
-#### [SWOT Level 2 River Single-Pass Vector Data Product GIS services](https://podaac.github.io/tutorials/notebooks/GIS/SWOT_Rivers_EGIS_Services.html)
+        - #### [SWOT Level 2 River Single-Pass Vector Data Product GIS services](https://podaac.github.io/tutorials/notebooks/GIS/SWOT_Rivers_EGIS_Services.html)
 
-#### [SWOT Rivers EGIS Access Guide](../notebooks/GIS/SWOT_EGIS_access.ipynb)
+        - #### [SWOT Rivers EGIS Access Guide](../notebooks/GIS/SWOT_EGIS_access.ipynb) - ArcGIS Pro/QGIS Tutorial
 
-#### [SWOT Rivers EGIS Python Guide](../notebooks/GIS/SWOT_EGIS_access_Python.ipynb)
+        - #### [SWOT Rivers EGIS Python Guide](../notebooks/GIS/SWOT_EGIS_access_Python.ipynb) - Python Tutorial
 
-### **Transform**
+### **Transform Data**
 
 #### [Datum Conversion](SWOT_Datum.qmd) - transforming to or from EGM2008/WGS84 to compare other data with SWOT
 
@@ -174,22 +182,13 @@ In [Earthdata Search GUI](https://search.earthdata.nasa.gov/search):
 
 [Hydrocron](https://podaac.github.io/hydrocron/intro.html) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.11193245.svg)](https://doi.org/10.5281/zenodo.11193245) - an API that repackages the river (L2_HR_RiverSP) and lake (L2_HR_LakeSP) shapefile datasets into csv or GeoJSON formats that make time-series analysis easier. SWOT data is archived as individually timestamped shapefiles, which would otherwise require users to perform potentially thousands of file operations per feature to view the data as a timeseries. Hydrocron makes this possible with a single API call. 
 
-[SWODLR](https://github.com/podaac/swodlr) - a system for generating on demand raster products from SWOT L2 raster data with custom resolutions, projections, and extents. *-in development*
-
-[HiTIDE subsetter for Sea Surface Height Products](https://hitide.podaac.earthdatacloud.nasa.gov/) - select KaRIn instrument in `sensors`, see video tutorial [here](https://www.youtube.com/watch?v=S8MIHltlwWA)
+[WISP (Water Information from SPace) by USGS](https://apps.usgs.gov/wisp) - developed by USGS, leverages Hydrocron to provide interactive visualization and download of SWOT HR L2 data alongside USGS gauge measurements.
 
 [SWOT Viz by CUAHSI](https://swotvis.cuahsi.io/) - an interactive dashboard where you can click on a water body and get a time series of SWOT data globally.
 
-### **SWORD of Science**
-
-The SWORD of Science (SoS) is a community-driven dataset produced for and from the execution of the Confluence workflow which is a cloud-based workflow that executes on SWOT observations to produce river discharge parameter estimates. Data granules contain two files, priors and results. The priors file contains prior information, such as in-situ gauge data and model output that is used to generate the discharge products. The results file contains the resulting river discharge data products.
-
-- [Explore river discharge](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE.ipynb)
-- [Explore river discharge with gauge data](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_gauges.ipynb)
-- [Plot ALL river discharge algorithms](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_gauges_plot_all.ipynb)
-- [Visualize river discharge](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_visualize.ipynb)
+[SWODLR](https://github.com/podaac/swodlr) - a system for generating on demand raster products from SWOT L2 raster data with custom resolutions, projections, and extents. *-in development*
 
-For more information about SWOT discharge, see the following paper: [https://doi.org/10.1029/2021WR031614](https://doi.org/10.1029/2021WR031614)
+[HiTIDE subsetter for Sea Surface Height Products](https://hitide.podaac.earthdatacloud.nasa.gov/) - select KaRIn instrument in `sensors`, see video tutorial [here](https://www.youtube.com/watch?v=S8MIHltlwWA)
 
 ## Additional Resources
 
@@ -205,6 +204,13 @@ For more information about SWOT discharge, see the following paper: [https://doi
 
 [SWOT Data Product User Feedback](https://forum.earthdata.nasa.gov/viewtopic.php?t=5270) - Post on this topic in the Earthdata Forum to give feedback or ask questions of the experts!
 
+SWORD of Science - The SWORD of Science (SoS) is a community-driven dataset produced for and from the execution of the Confluence workflow which is a cloud-based workflow that executes on SWOT observations to produce river discharge parameter estimates. Data granules contain two files, priors and results. The priors file contains prior information, such as in-situ gauge data and model output that is used to generate the discharge products. The results file contains the resulting river discharge data products. For more information about SWOT discharge, see the following paper: [https://doi.org/10.1029/2021WR031614](https://doi.org/10.1029/2021WR031614)
+
+- [Explore river discharge](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE.ipynb)
+- [Explore river discharge with gauge data](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_gauges.ipynb)
+- [Plot ALL river discharge algorithms](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_gauges_plot_all.ipynb)
+- [Visualize river discharge](../notebooks/datasets/SWOT_L4_DAWG_SOS_DISCHARGE_visualize.ipynb)
+
 ### **Databases & Dashboards**
 
 [SWOT River Database (SWORD)](https://www.swordexplorer.com/) - the database for rivers SWOT products are based upon, great for discovering river reach IDs!
@@ -213,13 +219,15 @@ For more information about SWOT discharge, see the following paper: [https://doi
 
 [SWOT Viz by CUAHSI](https://swotvis.cuahsi.io/) - an interactive dashboard where you can click on a water body and get a time series of SWOT data globally.
 
+[WISP (Water Information from SPace) by USGS](https://apps.usgs.gov/wisp) - developed by USGS, leverages Hydrocron to provide interactive visualization and download of SWOT HR L2 data alongside USGS gauge measurements.
+
 ### **Videos**
 
 [SWOT YouTube Playlist](https://www.youtube.com/playlist?list=PLDWiCz1Ka4kRhE-g39HwvvyMLtn87m1vH) - includes 15 min overview of hydrology products, 2-hour data access workshop, and SWOT office hours session
 
 [SWOT Mission: Opportunities for Data and Applications](https://www.youtube.com/watch?v=HGaxzriZHXA&list=PLv45XYTQR8EtPoPZgfTvw2KNTvDQK8RL7) - 13 min, Presented for the participants of EOTEC DevNet regional flood working groups, October 2024
 
-[Earthdata Webinar: Accessing Data for the World's Water with SWOT](https://www.earthdata.nasa.gov/learn/webinars-and-tutorials/webinar-podaac-2024-03-20) - Learn how to discover, access, and use SWOT mission data and how these data can lead to new, innovative science and applications in the world of water with this hour-long webinar in March 2024.
+[Earthdata Webinar: Accessing Data for the World's Water with SWOT](https://www.earthdata.nasa.gov/learn/webinars/accessing-data-worlds-water-swot) - Learn how to discover, access, and use SWOT mission data and how these data can lead to new, innovative science and applications in the world of water with this hour-long webinar in March 2024.
 
 ### **SWOT Community GitHub Repository**
 
@@ -233,7 +241,15 @@ This is a code space for the global SWOT mission community. We share experience,
 
 [Unveiling the first global observations of high resolution Sea Surface Height from SWOT](https://podaac.jpl.nasa.gov/DataAction-2023-12-07-Unveiling-the-first-global-observations-of-high-resolution-Sea-Surface-Height-from-SWOT)
 
-### **Workshops**
+### **Workshops & Webinars**
+
+#### **2025 From Space to Solutions: Access, Visualization, and Analysis Services for SWOT Hydrology**
+
+[https://www.earthdata.nasa.gov/learn/webinars/from-space-solutions-access-visualization-analysis-services-swot-hydrology](https://www.earthdata.nasa.gov/learn/webinars/from-space-solutions-access-visualization-analysis-services-swot-hydrology )
+
+#### **2024 Accessing Data for the World's Water with SWOT (HiTIDE, Cloud and Local Access)**
+
+[https://www.earthdata.nasa.gov/learn/webinars/accessing-data-worlds-water-swot](https://www.earthdata.nasa.gov/learn/webinars/accessing-data-worlds-water-swot)
 
 #### **2024 SWOT Early Career Researcher Workshop Using Binder**
 
@@ -252,4 +268,3 @@ This workshop focuses on the SWOT Hydrology datasets including river and lake ve
 [https://podaac.github.io/2022-SWOT-Ocean-Cloud-Workshop/](https://podaac.github.io/2022-SWOT-Ocean-Cloud-Workshop/){.uri}
 
 The goal of the workshop was to enable the (oceanography) science team to be ready for processing and handling the large volumes of SWOT SSH data in the cloud. Learning objectives focus on how to access the [simulated SWOT L2 SSH data](https://podaac.jpl.nasa.gov/announcements/2022-01-31-Release-simulated-SWOT-SSH-version1-datasets) from Earthdata Cloud either by downloading or accessing the data on the cloud.
-