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  1. human-phenotype-ontology human-phenotype-ontology Public

    Ontology for the description of human clinical features

    Makefile 306 54

  2. cell-ontology cell-ontology Public

    An ontology of cell types

    Makefile 168 53

  3. uberon uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    Emacs Lisp 138 31

  4. upheno upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    Makefile 79 18

  5. bio-attribute-ontology bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    Jupyter Notebook 27 11

  6. ncbitaxon ncbitaxon Public

    Build for NCBITaxon

    Python 27 7

Repositories

Showing 10 of 63 repositories
  • uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    obophenotype/uberon’s past year of commit activity
    Emacs Lisp 138 31 308 (2 issues need help) 21 Updated Apr 24, 2025
  • cell-ontology Public

    An ontology of cell types

    obophenotype/cell-ontology’s past year of commit activity
    Makefile 168 CC-BY-4.0 53 275 21 Updated Apr 24, 2025
  • human-phenotype-ontology Public

    Ontology for the description of human clinical features

    obophenotype/human-phenotype-ontology’s past year of commit activity
    Makefile 306 54 256 10 Updated Apr 24, 2025
  • bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    obophenotype/bio-attribute-ontology’s past year of commit activity
    Jupyter Notebook 27 CC0-1.0 11 82 8 Updated Apr 15, 2025
  • hpo-translations Public

    This repo will contain the Human Phenotype Ontology language profiles

    obophenotype/hpo-translations’s past year of commit activity
    Makefile 4 3 11 0 Updated Apr 14, 2025
  • upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    obophenotype/upheno’s past year of commit activity
    Makefile 79 CC0-1.0 18 256 (5 issues need help) 19 Updated Apr 14, 2025
  • c-elegans-development-ontology Public

    C. elegans Development Ontology

    obophenotype/c-elegans-development-ontology’s past year of commit activity
    Makefile 5 CC-BY-4.0 2 0 0 Updated Apr 1, 2025
  • c-elegans-phenotype-ontology Public

    Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase

    obophenotype/c-elegans-phenotype-ontology’s past year of commit activity
    Makefile 11 CC-BY-4.0 4 3 0 Updated Apr 1, 2025
  • upheno-dev Public

    Framework for the automated construction of uPheno 2.0

    obophenotype/upheno-dev’s past year of commit activity
    Jupyter Notebook 5 MIT 5 37 7 Updated Mar 31, 2025
  • c-elegans-gross-anatomy-ontology Public

    C. elegans Gross Anatomy Ontology

    obophenotype/c-elegans-gross-anatomy-ontology’s past year of commit activity
    Makefile 7 CC-BY-4.0 2 7 0 Updated Mar 26, 2025
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