This repository is meant to be a centralized hub for all the mercure modules out there.
Add your module to the modules.json file.
{
"name": "<mandatory_field> -> (str)",
"description": "<mandatory_field> -> (str)",
"githubUrl": "<mandatory_field> -> (str)",
"dockerhubImage": "<optional_field> -> (str)",
"supportedImageTags": "<optional_field> -> list(str)",
"coverPhotoUrl": "<optional_field> -> (str)",
"isMonaiModule": "<optional_field> -> (bool)",
"status": "active"
}Checkout the dev branch and push the above change. It will run the workflow to automatically update the README.md table with the latest module changes.
Note: Changes will be applied manually by the authors to the main branch for better maintenance.
Note: Please don't add your module at the end of the array in the modules.json file to avoid conflicts. It'd be better if you choose a random place in the array.
| Module | Statistics |
|---|---|
Map Monaiclassify - map-monaiclassify by mercure-imaging Lung Nodule Detection module that can be packaged as Monai Application Package. It can be run in isolation and can also be incorporated into Mercure workflow. Docker Image: mercureimaging/map-monaiclassify:latest |
  |
Mercure Anonymizer - mercure-anonymizer by mercure-imaging DICOM anonymization module for mercure Docker Image: mercureimaging/mercure-anonymizer:latest |
  |
Mercure Dcm2bids - mercure-dcm2bids by mercure-imaging Mercure Module to run dcm2bids conversion in mercure. Docker Image: mercureimaging/mercure-dcm2bids:latest |
  |
Mercure Decompressor - mercure-decompressor by mercure-imaging Mercure module to decompress DICOM images. It uses the decoding plugins provided in the Pydicom package to decompress the files having different compressed transfer syntaxes. Docker Image: mercureimaging/mercure-decompressor:latest |
  |
Mercure Exampleinference - mercure-exampleinference by mercure-imaging Example module demonstrating the inference of a DL-based segmentation model. Docker Image: mercureimaging/mercure-exampleinference:latest |
  |
Mercure Pyapetnet - mercure-pyapetnet by mercure-imaging Mercure module to deploy pyapetnet - a convolutional neural network (CNN) to mimick the behavior of anatomy-guided PET reconstruction in image space. Docker Image: mercureimaging/mercure-pyapetnet:latest |
  |
Mercure Radiomics - mercure-radiomics by mercure-imaging Mercure module to run IBSI compliant radiomics feature extraction. Docker Image: mercureimaging/mercure-radiomics:latest |
  |
Mercure Testmodule - mercure-testmodule by mercure-imaging Demo module that shows how to write mercure processing modules Docker Image: mercureimaging/mercure-testmodule:latest |
  |
Mercure Totalsegmentator - mercure-totalsegmentator by mercure-imaging Mercure module to deploy TotalSegmentator tool for segmentation of 104 classes in CT images and 56 classes in MR images. Docker Image: mercureimaging/mercure-totalsegmentator:latest |
  |