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Cosmetics in figure_2_iteration_benchmark.py #15

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Cosmetics in figure_2_iteration_benchmark.py #15

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8 changes: 3 additions & 5 deletions figure_2_iteration_benchmark.py
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Original file line number Diff line number Diff line change
Expand Up @@ -22,8 +22,6 @@


BATCH_SIZE = 128
ln.settings.transform.stem_uid = "r9vQub7PWucj"
ln.settings.transform.version = "1"


def index_iter(n_obs, batch_size, shuffle=True):
Expand Down Expand Up @@ -431,11 +429,11 @@ def main(is_test: bool = True):
if not is_test:
assert ln.setup.settings.user.handle != "anonymous"

# track script
ln.track()
# track run of script
ln.track("r9vQub7PWucj")

# load input data
artifact = ln.Artifact.using("laminlabs/arrayloader-benchmarks").filter(uid="z3AsAOO39crEioi5kEaG").one()
artifact = ln.Artifact.using("laminlabs/arrayloader-benchmarks").get("z3AsAOO39crEioi5kEaG")

# subset to 5k genes and less for test runs
nrows = 256 if is_test else None
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