Kristoffer Nielbo's Personal Website

A minimal personal website hosted via GitHub Pages. It contains basic information and a dynamically generated chronological list of publications enriched with visualizations.

Repository Structure

.
├── README.md                          # Documentation of the repository
├── figs
│   ├── publication_trends.png         # Trends and analytics of publications
│   └── yearly_publication_bigraphs.png # Annual bipartite author-journal graphs
├── files
│   └── pure_research_outputs.html     # Source HTML publication data
├── index.html                         # Homepage
├── publications.html                  # Chronological publication list (generated)
├── publications_template.html         # Template for the publication list
├── requirements.txt                   # Python package dependencies
└── src
    ├── publication_bigraphs.py        # Generates yearly bipartite graphs (authors & journals)
    ├── publication_insert_fig.py      # Inserts header figures into publications.html
    ├── publication_trend.py           # Creates publication trends and analytics plots
    ├── pure_to_web.py                 # Generates publications.html from HTML source
    └── update_publications.sh         # Bash script to automate publications update

Installation

Clone the repository and install dependencies:

git clone <repo-url>
cd knielbo.github.io
pip install -r requirements.txt

Usage

Run the update_publications.sh script to regenerate your publications and visualizations:

cd src
bash update_publications.sh

This script executes the following processes in order:

• Parse and update the publication list (pure_to_web.py)
• Generate yearly bipartite author-journal graphs (publication_bigraphs.py)
• Insert header figures into the HTML file (publication_insert_fig.py)
• Update publication trend analytics (publication_trend.py)

The updated publications.html will contain your latest publications and visualizations.

Requirements

• Python 3.x
• See requirements.txt for detailed dependencies.