ProtExtract v1.0.1

• Fixed a bug which caused option parsing to fail when the conda environment had not been created yet.
• Corrected the output directory path to display a single slash instead of two at the end.
• Added 'v' prefix to the version number.

ProtExtract 1.0.0

• Added an option to set the number of threads used by DIAMOND, defaulting to all available cores.
• Added an option to set an output directory suffix, defaulting to no suffix.
• The default sensitivity for DIAMOND is now 'default', which was not available before.
• The number of extracted and verified proteins per proteome is now shown in the terminal output.
• Renamed the folder 'ProtExtract_files' to 'ProtExtract_scripts'.
• Improved log file handling.
• Improved gap detection.
• Updated README.md.

ProtExtract 0.9.1

First release version.