Front

---

layout: userdoc title: | IQ-TREE version 2.0: Tutorials and Manual Phylogenomic software by maximum likelihood

subtitle: "http://www.iqtree.org" author: Bui Quang Minh, Jana Trifinopoulos, Dominik Schrempf, Heiko A. Schmidt date: April 27, 2020 keywords: [phylogenomic inference, maximum likelihood] toc: true papersize: A4 documentclass: book margin-left: 1in margin-right: 1.2in fontsize: 12pt linkcolor: blue urlcolor: blue toccolor: black institute: Australian National University, https://www.anu.edu.au include-before: | Preface

header-includes:

• \lstset{language=bash}

• \lstset{breaklines=true}

• \lstset{basicstyle=\small\ttfamily}

• \lstset{extendedchars=true}

• \lstset{tabsize=2}

• \lstset{columns=fixed}

• \lstset{showstringspaces=false}

• \lstset{frame=trbl}

• \lstset{framesep=5pt}

• \lstset{xleftmargin=5pt,xrightmargin=5pt}

• \lstset{framerule=0.3pt,rulecolor=\color{gray!50!white}}

• \lstset{postbreak=\raisebox{0ex}[0ex][0ex]{}}

• \lstset{backgroundcolor=\color{gray!15!white}}

• \usepackage{tcolorbox}

• \newtcolorbox{myquote}{colback=red!5!white,colframe=red!60!white}

• \renewenvironment{quote}{\begin{myquote}}{\end{myquote}}

• \providecommand{\subtitle}[1]{\usepackage{titling}\posttitle{\par\large#1\end{center}}}

---