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Pull requests: davidemms/OrthoFinder

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Pull requests list

Update setup.py to include create_files_for_hogs.py
#853 opened Sep 18, 2023 by Matt-BF Loading…
Add LAST search option
#786 opened Feb 3, 2023 by kullrich Loading…
Reduce number of required file handles
#650 opened Nov 30, 2021 by Phhere Loading…
2
Specify version in docker pull
#648 opened Nov 24, 2021 by olgabot Loading…
Set the default number of threads to the number of CPUs/cores the process is really allowed to use
#620 opened Sep 14, 2021 by scipparis Loading…
use resource for possible open number of files
#616 opened Sep 9, 2021 by EricDeveaud Loading…
rename ExampleDataset to ExampleData in setup.py
#500 opened Feb 1, 2021 by boegel Loading…
Move MAFFT and FastTree config into config.json
#438 opened Aug 6, 2020 by dilema Loading…
1
Extra script: annotate Orthogroups (HOG) from fasta descriptions
#434 opened Jul 27, 2020 by ViriatoII Loading…
1
check if stderr/stdout is byte, then encode it if it was a string
#321 opened Dec 16, 2019 by FredericBGA Loading…
ProTip! What’s not been updated in a month: updated:<2025-09-05.