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Update avantonder nextflow scripts

Status: Open.

#49 In cambiotraining/bacterial-genomics;

· avantonder opened on Aug 13, 2025

Issues with 04-plot_pling.R

Status: Open.

#48 In cambiotraining/bacterial-genomics;

· avantonder opened on Jul 3, 2025

<code>funcscan</code> CARD database - pre-download to avoid server crash in live courses

Status: Open.

#47 In cambiotraining/bacterial-genomics;

· tavareshugo opened on Jul 3, 2025

Update preprocessed data for assembleBAC

Status: Open.

#46 In cambiotraining/bacterial-genomics;

· avantonder opened on Jul 1, 2025

Add <code>vibecheck</code> to vibrio exercise

Status: Open.

#41 In cambiotraining/bacterial-genomics;

· tavareshugo opened on May 22, 2025

add appendix of alternative tools

enhancementNew feature or requestNew feature or request

Status: Open.

#31 In cambiotraining/bacterial-genomics;

· tavareshugo opened on Aug 22, 2024

add worked examples start-to-finish

Status: Open.

#27 In cambiotraining/bacterial-genomics;

· tavareshugo opened on Feb 13, 2024

Ideas for expanding materials

Status: Open.

#24 In cambiotraining/bacterial-genomics;

· tavareshugo opened on Dec 13, 2023