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@abhishekagrawal-atlan abhishekagrawal-atlan commented Oct 22, 2025

Changelog

  • Stale connection from state getting fetched over successive runs of WF in crossover 2.0

Checklist

  • Additional tests added
  • All CI checks passed
  • Relevant documentation updated

Copyleft License Compliance

  • Have you used any code that is subject to a Copyleft license (e.g., GPL, AGPL, LGPL)?
  • If yes, have you modified the code in the context of this project? please share additional details.

Note

Refresh activity state if older than 15 minutes by tracking and updating last_updated_timestamp; initialize timestamp in SQL metadata extraction state.

  • Core activities:
    • Add time-based refresh in ActivitiesInterface._get_state: if current_timestamp - last_updated_timestamp > 15m, reinitialize state via _set_state.
    • Extend ActivitiesState with last_updated_timestamp.
  • SQL metadata extraction:
    • Extend BaseSQLMetadataExtractionActivitiesState with last_updated_timestamp.
    • Set last_updated_timestamp in _set_state after initializing sql_client and handler.

Written by Cursor Bugbot for commit 54470ba. This will update automatically on new commits. Configure here.

Copilot AI review requested due to automatic review settings October 22, 2025 15:06
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Pull Request Overview

This PR addresses an issue where stale connection data was persisting across successive workflow runs in crossover 2.0. The fix ensures that state is properly cleaned before each activity execution.

Key Changes:

  • Modified state management in _get_state to unconditionally clean state before setting new state

Tip: Customize your code reviews with copilot-instructions.md. Create the file or learn how to get started.

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github-actions bot commented Oct 22, 2025

📜 Docstring Coverage Report

RESULT: PASSED (minimum: 30.0%, actual: 75.4%)

Detailed Coverage Report
======= Coverage for /home/runner/work/application-sdk/application-sdk/ ========
----------------------------------- Summary ------------------------------------
| Name                                                                              | Total | Miss | Cover | Cover% |
|-----------------------------------------------------------------------------------|-------|------|-------|--------|
| application_sdk/__init__.py                                                       |     1 |    0 |     1 |   100% |
| application_sdk/constants.py                                                      |     1 |    0 |     1 |   100% |
| application_sdk/version.py                                                        |     1 |    0 |     1 |   100% |
| application_sdk/worker.py                                                         |     4 |    0 |     4 |   100% |
| application_sdk/activities/__init__.py                                            |    10 |    0 |    10 |   100% |
| application_sdk/activities/lock_management.py                                     |     3 |    0 |     3 |   100% |
| application_sdk/activities/common/__init__.py                                     |     1 |    1 |     0 |     0% |
| application_sdk/activities/common/models.py                                       |     3 |    1 |     2 |    67% |
| application_sdk/activities/common/utils.py                                        |     9 |    1 |     8 |    89% |
| application_sdk/activities/metadata_extraction/__init__.py                        |     1 |    1 |     0 |     0% |
| application_sdk/activities/metadata_extraction/base.py                            |     5 |    1 |     4 |    80% |
| application_sdk/activities/metadata_extraction/rest.py                            |     1 |    1 |     0 |     0% |
| application_sdk/activities/metadata_extraction/sql.py                             |    25 |    5 |    20 |    80% |
| application_sdk/activities/query_extraction/__init__.py                           |     1 |    1 |     0 |     0% |
| application_sdk/activities/query_extraction/sql.py                                |    13 |    1 |    12 |    92% |
| application_sdk/application/__init__.py                                           |    10 |    3 |     7 |    70% |
| application_sdk/application/metadata_extraction/sql.py                            |     7 |    1 |     6 |    86% |
| application_sdk/clients/__init__.py                                               |     4 |    0 |     4 |   100% |
| application_sdk/clients/atlan.py                                                  |     5 |    3 |     2 |    40% |
| application_sdk/clients/atlan_auth.py                                             |    10 |    0 |    10 |   100% |
| application_sdk/clients/base.py                                                   |     6 |    1 |     5 |    83% |
| application_sdk/clients/models.py                                                 |     3 |    0 |     3 |   100% |
| application_sdk/clients/redis.py                                                  |    27 |    0 |    27 |   100% |
| application_sdk/clients/sql.py                                                    |    16 |    0 |    16 |   100% |
| application_sdk/clients/temporal.py                                               |    13 |    1 |    12 |    92% |
| application_sdk/clients/utils.py                                                  |     2 |    1 |     1 |    50% |
| application_sdk/clients/workflow.py                                               |     9 |    2 |     7 |    78% |
| application_sdk/common/__init__.py                                                |     1 |    1 |     0 |     0% |
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| application_sdk/common/dapr_utils.py                                              |     2 |    1 |     1 |    50% |
| application_sdk/common/dataframe_utils.py                                         |     2 |    1 |     1 |    50% |
| application_sdk/common/error_codes.py                                             |    14 |    2 |    12 |    86% |
| application_sdk/common/file_converter.py                                          |     9 |    5 |     4 |    44% |
| application_sdk/common/utils.py                                                   |    16 |    2 |    14 |    88% |
| application_sdk/decorators/__init__.py                                            |     1 |    1 |     0 |     0% |
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| application_sdk/decorators/mcp_tool.py                                            |     3 |    1 |     2 |    67% |
| application_sdk/docgen/__init__.py                                                |     5 |    2 |     3 |    60% |
| application_sdk/docgen/exporters/__init__.py                                      |     1 |    1 |     0 |     0% |
| application_sdk/docgen/exporters/mkdocs.py                                        |     7 |    3 |     4 |    57% |
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| application_sdk/docgen/models/manifest/section.py                                 |     2 |    1 |     1 |    50% |
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| application_sdk/docgen/parsers/manifest.py                                        |     6 |    1 |     5 |    83% |
| application_sdk/events/__init__.py                                                |     1 |    0 |     1 |   100% |
| application_sdk/events/models.py                                                  |    12 |    1 |    11 |    92% |
| application_sdk/handlers/__init__.py                                              |     7 |    1 |     6 |    86% |
| application_sdk/handlers/base.py                                                  |     7 |    1 |     6 |    86% |
| application_sdk/handlers/sql.py                                                   |    19 |    6 |    13 |    68% |
| application_sdk/inputs/__init__.py                                                |     7 |    1 |     6 |    86% |
| application_sdk/inputs/iceberg.py                                                 |     7 |    3 |     4 |    57% |
| application_sdk/inputs/json.py                                                    |     7 |    1 |     6 |    86% |
| application_sdk/inputs/parquet.py                                                 |     7 |    1 |     6 |    86% |
| application_sdk/inputs/sql_query.py                                               |    11 |    1 |    10 |    91% |
| application_sdk/interceptors/__init__.py                                          |     1 |    1 |     0 |     0% |
| application_sdk/interceptors/cleanup.py                                           |     7 |    1 |     6 |    86% |
| application_sdk/interceptors/events.py                                            |     9 |    1 |     8 |    89% |
| application_sdk/interceptors/lock.py                                              |    10 |    2 |     8 |    80% |
| application_sdk/observability/__init__.py                                         |     1 |    1 |     0 |     0% |
| application_sdk/observability/logger_adaptor.py                                   |    31 |    3 |    28 |    90% |
| application_sdk/observability/metrics_adaptor.py                                  |    16 |    2 |    14 |    88% |
| application_sdk/observability/observability.py                                    |    24 |    1 |    23 |    96% |
| application_sdk/observability/traces_adaptor.py                                   |    16 |    1 |    15 |    94% |
| application_sdk/observability/utils.py                                            |     4 |    1 |     3 |    75% |
| application_sdk/observability/decorators/observability_decorator.py               |     7 |    4 |     3 |    43% |
| application_sdk/outputs/__init__.py                                               |    14 |    0 |    14 |   100% |
| application_sdk/outputs/iceberg.py                                                |     5 |    1 |     4 |    80% |
| application_sdk/outputs/json.py                                                   |     8 |    1 |     7 |    88% |
| application_sdk/outputs/parquet.py                                                |    15 |    1 |    14 |    93% |
| application_sdk/server/__init__.py                                                |     4 |    0 |     4 |   100% |
| application_sdk/server/fastapi/__init__.py                                        |    24 |    5 |    19 |    79% |
| application_sdk/server/fastapi/models.py                                          |    27 |   27 |     0 |     0% |
| application_sdk/server/fastapi/utils.py                                           |     2 |    0 |     2 |   100% |
| application_sdk/server/fastapi/middleware/logmiddleware.py                        |     4 |    4 |     0 |     0% |
| application_sdk/server/fastapi/middleware/metrics.py                              |     3 |    3 |     0 |     0% |
| application_sdk/server/fastapi/routers/__init__.py                                |     1 |    1 |     0 |     0% |
| application_sdk/server/fastapi/routers/server.py                                  |     8 |    2 |     6 |    75% |
| application_sdk/server/mcp/__init__.py                                            |     1 |    1 |     0 |     0% |
| application_sdk/server/mcp/models.py                                              |     2 |    2 |     0 |     0% |
| application_sdk/server/mcp/server.py                                              |     5 |    0 |     5 |   100% |
| application_sdk/services/__init__.py                                              |     1 |    0 |     1 |   100% |
| application_sdk/services/atlan_storage.py                                         |     5 |    0 |     5 |   100% |
| application_sdk/services/eventstore.py                                            |     4 |    0 |     4 |   100% |
| application_sdk/services/objectstore.py                                           |    15 |    0 |    15 |   100% |
| application_sdk/services/secretstore.py                                           |    10 |    0 |    10 |   100% |
| application_sdk/services/statestore.py                                            |     8 |    1 |     7 |    88% |
| application_sdk/test_utils/__init__.py                                            |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/workflow_monitoring.py                                 |     3 |    0 |     3 |   100% |
| application_sdk/test_utils/e2e/__init__.py                                        |    14 |    2 |    12 |    86% |
| application_sdk/test_utils/e2e/base.py                                            |    16 |    2 |    14 |    88% |
| application_sdk/test_utils/e2e/client.py                                          |    10 |    2 |     8 |    80% |
| application_sdk/test_utils/e2e/conftest.py                                        |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/e2e/utils.py                                           |     3 |    1 |     2 |    67% |
| application_sdk/test_utils/hypothesis/__init__.py                                 |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/__init__.py                      |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/sql_client.py                    |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/temporal.py                      |     6 |    1 |     5 |    83% |
| application_sdk/test_utils/hypothesis/strategies/clients/__init__.py              |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/clients/sql.py                   |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/common/__init__.py               |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/common/logger.py                 |     3 |    0 |     3 |   100% |
| application_sdk/test_utils/hypothesis/strategies/handlers/__init__.py             |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/handlers/sql/__init__.py         |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/handlers/sql/sql_metadata.py     |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/handlers/sql/sql_preflight.py    |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/inputs/__init__.py               |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/inputs/json_input.py             |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/inputs/parquet_input.py          |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/outputs/__init__.py              |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/outputs/json_output.py           |     2 |    1 |     1 |    50% |
| application_sdk/test_utils/hypothesis/strategies/outputs/statestore.py            |     3 |    1 |     2 |    67% |
| application_sdk/test_utils/hypothesis/strategies/server/__init__.py               |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/hypothesis/strategies/server/fastapi/__init__.py       |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/scale_data_generator/__init__.py                       |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/scale_data_generator/config_loader.py                  |    10 |    4 |     6 |    60% |
| application_sdk/test_utils/scale_data_generator/data_generator.py                 |    10 |    3 |     7 |    70% |
| application_sdk/test_utils/scale_data_generator/driver.py                         |     3 |    3 |     0 |     0% |
| application_sdk/test_utils/scale_data_generator/output_handler/__init__.py        |     1 |    1 |     0 |     0% |
| application_sdk/test_utils/scale_data_generator/output_handler/base.py            |     7 |    3 |     4 |    57% |
| application_sdk/test_utils/scale_data_generator/output_handler/csv_handler.py     |     5 |    5 |     0 |     0% |
| application_sdk/test_utils/scale_data_generator/output_handler/json_handler.py    |     5 |    5 |     0 |     0% |
| application_sdk/test_utils/scale_data_generator/output_handler/parquet_handler.py |     6 |    6 |     0 |     0% |
| application_sdk/transformers/__init__.py                                          |     3 |    1 |     2 |    67% |
| application_sdk/transformers/atlas/__init__.py                                    |     6 |    1 |     5 |    83% |
| application_sdk/transformers/atlas/sql.py                                         |    25 |    4 |    21 |    84% |
| application_sdk/transformers/common/__init__.py                                   |     1 |    1 |     0 |     0% |
| application_sdk/transformers/common/utils.py                                      |     6 |    0 |     6 |   100% |
| application_sdk/transformers/query/__init__.py                                    |    11 |    2 |     9 |    82% |
| application_sdk/workflows/__init__.py                                             |     4 |    0 |     4 |   100% |
| application_sdk/workflows/metadata_extraction/__init__.py                         |     2 |    2 |     0 |     0% |
| application_sdk/workflows/metadata_extraction/sql.py                              |     8 |    0 |     8 |   100% |
| application_sdk/workflows/query_extraction/__init__.py                            |     2 |    2 |     0 |     0% |
| application_sdk/workflows/query_extraction/sql.py                                 |     4 |    0 |     4 |   100% |
| examples/application_custom_fastapi.py                                            |    14 |   14 |     0 |     0% |
| examples/application_fastapi.py                                                   |     9 |    9 |     0 |     0% |
| examples/application_hello_world.py                                               |     7 |    7 |     0 |     0% |
| examples/application_sql.py                                                       |     5 |    4 |     1 |    20% |
| examples/application_sql_miner.py                                                 |     5 |    4 |     1 |    20% |
| examples/application_sql_with_custom_pyatlan_transformer.py                       |    11 |    9 |     2 |    18% |
| examples/application_sql_with_custom_transformer.py                               |     9 |    8 |     1 |    11% |
| examples/run_examples.py                                                          |     2 |    1 |     1 |    50% |
| tests/__init__.py                                                                 |     1 |    1 |     0 |     0% |
| tests/conftest.py                                                                 |     3 |    0 |     3 |   100% |
| tests/unit/__init__.py                                                            |     1 |    1 |     0 |     0% |
| tests/unit/test_worker.py                                                         |    10 |    5 |     5 |    50% |
| tests/unit/activities/__init__.py                                                 |     1 |    1 |     0 |     0% |
| tests/unit/activities/test_activities.py                                          |    34 |    0 |    34 |   100% |
| tests/unit/activities/test_lock_management.py                                     |    12 |    0 |    12 |   100% |
| tests/unit/activities/common/__init__.py                                          |     1 |    1 |     0 |     0% |
| tests/unit/activities/common/test_utils.py                                        |    28 |   10 |    18 |    64% |
| tests/unit/activities/metadata_extraction/__init__.py                             |     1 |    1 |     0 |     0% |
| tests/unit/activities/metadata_extraction/test_sql.py                             |    56 |   36 |    20 |    36% |
| tests/unit/activities/query_extraction/__init__.py                                |     1 |    1 |     0 |     0% |
| tests/unit/application/__init__.py                                                |     1 |    1 |     0 |     0% |
| tests/unit/application/test_application.py                                        |    36 |    3 |    33 |    92% |
| tests/unit/application/metadata_extraction/test_sql.py                            |    30 |    6 |    24 |    80% |
| tests/unit/clients/__init__.py                                                    |     1 |    1 |     0 |     0% |
| tests/unit/clients/test_async_sql_client.py                                       |    15 |   14 |     1 |     7% |
| tests/unit/clients/test_atlan_auth.py                                             |    10 |    0 |    10 |   100% |
| tests/unit/clients/test_atlan_client.py                                           |     7 |    7 |     0 |     0% |
| tests/unit/clients/test_atlanauth.py                                              |    10 |    0 |    10 |   100% |
| tests/unit/clients/test_base_client.py                                            |    23 |    1 |    22 |    96% |
| tests/unit/clients/test_redis_client.py                                           |    40 |    0 |    40 |   100% |
| tests/unit/clients/test_sql_client.py                                             |    28 |    6 |    22 |    79% |
| tests/unit/clients/test_temporal_client.py                                        |    16 |    3 |    13 |    81% |
| tests/unit/common/test_aws_utils.py                                               |    30 |    1 |    29 |    97% |
| tests/unit/common/test_credential_utils.py                                        |    11 |    1 |    10 |    91% |
| tests/unit/common/test_file_converter.py                                          |    29 |    0 |    29 |   100% |
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| tests/unit/decorators/test_mcp_tool.py                                            |    56 |    4 |    52 |    93% |
| tests/unit/docgen/parsers/test_directory_parser.py                                |    14 |    3 |    11 |    79% |
| tests/unit/docgen/parsers/test_manifest_parser.py                                 |    12 |   12 |     0 |     0% |
| tests/unit/handlers/__init__.py                                                   |     1 |    1 |     0 |     0% |
| tests/unit/handlers/test_base_handler.py                                          |    26 |    2 |    24 |    92% |
| tests/unit/handlers/sql/test_auth.py                                              |    10 |    4 |     6 |    60% |
| tests/unit/handlers/sql/test_check_schemas_and_databases.py                       |    14 |    4 |    10 |    71% |
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| tests/unit/handlers/sql/test_metadata.py                                          |    27 |   10 |    17 |    63% |
| tests/unit/handlers/sql/test_preflight_check.py                                   |    16 |   15 |     1 |     6% |
| tests/unit/handlers/sql/test_prepare_metadata.py                                  |    14 |    4 |    10 |    71% |
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| tests/unit/inputs/test_parquet.py                                                 |    45 |   31 |    14 |    31% |
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| tests/unit/outputs/test_output.py                                                 |    19 |    6 |    13 |    68% |
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| tests/unit/transformers/atlas/__init__.py                                         |     1 |    1 |     0 |     0% |
| tests/unit/transformers/atlas/test_column.py                                      |    17 |    6 |    11 |    65% |
| tests/unit/transformers/atlas/test_database.py                                    |     8 |    6 |     2 |    25% |
| tests/unit/transformers/atlas/test_function.py                                    |     9 |    5 |     4 |    44% |
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| tests/unit/transformers/atlas/test_schema.py                                      |     8 |    6 |     2 |    25% |
| tests/unit/transformers/atlas/test_table.py                                       |    13 |    6 |     7 |    54% |
| tests/unit/transformers/query/test_sql_transformer.py                             |    14 |    4 |    10 |    71% |
| tests/unit/transformers/query/test_sql_transformer_output_validation.py           |     5 |    2 |     3 |    60% |
| tests/unit/workflows/metadata_extraction/test_sql_workflow.py                     |     9 |    4 |     5 |    56% |
| tests/unit/workflows/query_extraction/__init__.py                                 |     1 |    1 |     0 |     0% |
| tests/unit/workflows/query_extraction/test_sql.py                                 |     8 |    3 |     5 |    62% |
|-----------------------------------------------------------------------------------|-------|------|-------|--------|
| TOTAL                                                                             |  2121 |  594 |  1527 |  72.0% |
---------------- RESULT: PASSED (minimum: 30.0%, actual: 72.0%) ----------------

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📦 Trivy Vulnerability Scan Results

Schema Version Created At Artifact Type
2 2025-10-31T03:13:17.40778393Z . filesystem

Report Summary

Target Type Vulnerabilities . filesystem ✅ None found

Scan Result Details

✅ No vulnerabilities found during the scan for ..

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github-actions bot commented Oct 22, 2025

📦 Trivy Secret Scan Results

Schema Version Created At Artifact Type
2 2025-10-31T03:13:23.903239054Z . filesystem

Report Summary

Target Type Secrets . filesystem ✅ None found

Scan Result Details

✅ No secrets found during the scan for ..

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github-actions bot commented Oct 22, 2025

🛠 Docs available at: https://k.atlan.dev/application-sdk/activity-state-fix

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atlan-ci commented Oct 22, 2025

☂️ Python Coverage

current status: ✅

Overall Coverage

Lines Covered Coverage Threshold Status
6468 4586 71% 0% 🟢

New Files

No new covered files...

Modified Files

No covered modified files...

updated for commit: 54470ba by action🐍

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github-actions bot commented Oct 22, 2025

🛠 Full Test Coverage Report: https://k.atlan.dev/coverage/application-sdk/pr/796

cursor[bot]

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cursor bot commented Oct 23, 2025

Bug: State Management Typo Causes Caching Failures

The state management logic has two issues. A typo ("worflow_id") causes _set_state to be called unconditionally, defeating state caching. Additionally, the timestamp-based refresh checks for the string literal "workflow_id" instead of the variable, preventing stale state detection from ever running. This leads to performance issues and potentially stale state.

Fix in Cursor Fix in Web

@abhishekagrawal-atlan abhishekagrawal-atlan changed the title fix: cleaning state and setting for each activity. fix: time based state refresh for each activity Oct 23, 2025
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cursor bot commented Oct 23, 2025

Bug: Timestamp Update Missing in Base Class

Missing timestamp update in base class _set_state method. The last_updated_timestamp field is only being set in the SQL-specific subclass (line 182 of sql.py), but the time-based refresh logic in _get_state expects this field to be set. This will cause AttributeError or None comparisons when non-SQL activities use the timestamp-based refresh feature. The base _set_state method should set self._state[workflow_id].last_updated_timestamp = datetime.now().

Fix in Cursor Fix in Web

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cursor bot commented Oct 23, 2025

Bug: Timestamp Handling Fails for Initial States

The timestamp refresh logic can fail if last_updated_timestamp is None (which it will be for states created before this change or if not set). When last_updated is None, the condition last_updated and current_timestamp - last_updated > timedelta(minutes=15) will skip the refresh due to short-circuit evaluation, leaving stale connections in place indefinitely. The code should handle the None case explicitly to refresh state when no timestamp exists.

Fix in Cursor Fix in Web

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3 participants