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@abyzovlab

Abyzov lab

Software packages developed in Abyzov's lab

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  1. CNVnator CNVnator Public

    a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

    C++ 226 68

  2. CNVpytor CNVpytor Public

    a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads

    Python 202 29

  3. AGE AGE Public

    a tools that implements an algorithm for optimal alignment of sequences with structural variants (SVs)

    C++ 9 7

  4. vcf2diploid vcf2diploid Public

    personal genome constructor

    Java 9 11

  5. All2 All2 Public

    A tool for filtering variants from all2all comparison of multiple clones or single cells

    Python 5 1

  6. Leucippus Leucippus Public

    A tool for confirmation of mosaic variants from targeted sequencing

    Java 3 1

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