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Earlham Institute

BBSRC-supported life science research institute in Norwich, UK

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  1. KAT KAT Public

    The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

    C++ 218 50

  2. NanoOK NanoOK Public

    Forked from richardmleggett/NanoOK

    Analysis tool for Nanopore sequencing data

    Java 33 8

  3. RAMPART RAMPART Public

    A configurable de novo assembly pipeline

    Java 28 6

  4. 361Division 361Division Public

    361 Division - Scientific Training, Education and Learning

    R 28 31

  5. kontaminant kontaminant Public

    Tool to look for contaminants, with a kmer database.

    C 15 5

  6. earlham-galaxytools earlham-galaxytools Public

    Galaxy tools and workflows developed at the Earlham Institute

    Python 14 14

Repositories

Showing 10 of 159 repositories
  • grassroots-installer Public

    Tools to automate the installation of Grassroots

    TGAC/grassroots-installer’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Aug 15, 2025
  • RShaw-PhD-Thesis Public

    Supplementary material for Rebecca Shaw's PhD - Genomic implications of severe population bottlenecks in two Mustelid species

    TGAC/RShaw-PhD-Thesis’s past year of commit activity
    0 0 0 0 Updated Aug 15, 2025
  • grassroots-service-marti Public

    A service to integrate Grassroots Field Trials and MARTI data

    TGAC/grassroots-service-marti’s past year of commit activity
    C 0 Apache-2.0 0 0 0 Updated Aug 15, 2025
  • grassroots-core Public

    The core libraries of the Grassroots infratructure

    TGAC/grassroots-core’s past year of commit activity
    C 1 Apache-2.0 0 0 0 Updated Aug 15, 2025
  • SingleCellSchemas Public

    For resources related to the EI Cellgen ISP, including metadata mappings and schemas for Single Cell Genomics and Spatial Transcriptomics experiments.

    TGAC/SingleCellSchemas’s past year of commit activity
    CSS 1 MIT 0 0 0 Updated Aug 14, 2025
  • grassroots-build-tools Public

    Scripts to manage the building of the different Grassroots infrastructure components

    TGAC/grassroots-build-tools’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Aug 14, 2025
  • COPO-schemas Public

    This repository provides a collection of schemas, or data objects, for representing different types of metadata.

    TGAC/COPO-schemas’s past year of commit activity
    1 MIT 0 0 0 Updated Aug 13, 2025
  • COPO-production Public

    COPO is a Django-based platform that serves as a metadata broker to describe research data per FAIR principles. It supports community-recognised metadata standards, ensuring data is discoverable, interoperable, and accessible. Submitted data is accessible via public repositories, promoting long-term preservation and reuse across systems.

    TGAC/COPO-production’s past year of commit activity
    JavaScript 2 MIT 2 0 1 Updated Aug 13, 2025
  • grassroots-service-field-trial Public

    A Grassroots service for storing the data for field trials

    TGAC/grassroots-service-field-trial’s past year of commit activity
    C 2 Apache-2.0 0 0 0 Updated Aug 12, 2025
  • rfparser Public

    Parse ResearchFish publications to update CKAN

    TGAC/rfparser’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 9, 2025
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