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24 changes: 19 additions & 5 deletions ppfleetx/models/protein_folding/attentions.py
Original file line number Diff line number Diff line change
Expand Up @@ -46,6 +46,7 @@ def __init__(self, config, global_config, q_dim, kv_dim, output_dim):

# TODO(GuoxiaWang): delete non fuse_attention related code on dcu
self.fuse_attention = self.global_config.fuse_attention
self.use_flash_attn = self.global_config.use_flash_attn
self.merge_qkv = (q_dim == kv_dim)

assert key_dim % num_head == 0
Expand Down Expand Up @@ -121,11 +122,24 @@ def forward(self, q_data, m_data, bias, nonbatched_bias=None):
if self.fuse_attention:
if nonbatched_bias is not None:
nonbatched_bias = paddle.unsqueeze(nonbatched_bias, axis=1)
_, _, _, _, _, _, _, output = _C_ops.fused_gate_attention(
q_data, m_data, self.query_w, self.key_w, self.value_w,
self.qkv_w, nonbatched_bias, bias, self.gating_w,
self.gating_b, self.output_w, self.output_b, 'has_gating',
self.config.gating, 'merge_qkv', self.merge_qkv)

import paddle.incubate.nn.functional as F
output = F.fused_gate_attention(
query=q_data,
key=m_data,
query_weight=self.query_w,
key_weight=self.key_w,
value_weight=self.value_w,
qkv_weight=self.qkv_w,
gate_linear_weight=self.gating_w,
gate_linear_bias=self.gating_b,
out_linear_weight=self.output_w,
out_linear_bias=self.output_b,
nonbatched_bias=nonbatched_bias,
attn_mask=bias,
has_gating=self.config.gating,
merge_qkv=self.merge_qkv,
use_flash_attn=self.use_flash_attn, )
else:
c = self.key_dim**(-0.5)
q = paddle.einsum('nbqa,ahc->nbqhc', q_data, self.query_w) * c
Expand Down