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JoelSchaust/README.md

Hi 👋, I'm Joél

M.Sc. Biosciences / Bioinformatics with a focus on Biomedical Data Science and Image Analysis at Julius-Maximilians-Universität Würzburg (JMU)

  • 🔭 I’m currently working on BioMeds @CCTB Würzburg

  • 🌱 I’m currently studying biomedical data science, image analysis tools, image segmentation, pipeline developement, fluorescence microscopy, RNA-sequencing data

Languages and Tools:

Python C# Git R Jupyter Bash Linux Pandas NumPy Image Analysis

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  1. BioMeDS/mudRapp-seq BioMeDS/mudRapp-seq Public

    In-situ sequencing with multiple direct RNA-assisted padlock probing (mudRapp-seq)

    Jupyter Notebook 1

  2. ISS-segmentation-pipeline ISS-segmentation-pipeline Public

    Whole-Cell-and-Nuclear-Segmentation-in-In-situ-Sequencing-Data-pipeline

    Jupyter Notebook 2

  3. permGWAS_Botany permGWAS_Botany Public

    Python