Skip to content
@HudsonAlpha

HudsonAlpha Institute for Biotechnology

Popular repositories Loading

  1. fmlrc2 fmlrc2 Public

    Rust 47 5

  2. CSL_public_benchmark CSL_public_benchmark Public

    Location of public benchmarking; primarily final results

    Shell 18

  3. aRNAPipe aRNAPipe Public

    Python 12 6

  4. VarSight VarSight Public

    Python 10 3

  5. STEVE STEVE Public

    Python 10 1

  6. rust-msbwt rust-msbwt Public

    place for building up a msbwt resource in Rust

    Rust 9 2

Repositories

Showing 10 of 33 repositories
  • talos Public Forked from populationgenomics/talos

    Fork for HudsonAlpha deployment of populationgenomics/talos

    HudsonAlpha/talos’s past year of commit activity
    Python 2 MIT 11 0 0 Updated Sep 17, 2025
  • iTF-Microglia Public

    All code generated for Rodriguez-Nunez et al. 2025

    HudsonAlpha/iTF-Microglia’s past year of commit activity
    R 0 MIT 0 0 0 Updated Sep 11, 2025
  • ClinvArbitration Public Forked from populationgenomics/ClinvArbitration

    A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the CPG

    HudsonAlpha/ClinvArbitration’s past year of commit activity
    Python 0 MIT 3 0 0 Updated Sep 3, 2025
  • Pre-Imputation-QC-Pipeline Public
    HudsonAlpha/Pre-Imputation-QC-Pipeline’s past year of commit activity
    Shell 0 1 0 0 Updated Apr 17, 2025
  • CSL_public_benchmark Public

    Location of public benchmarking; primarily final results

    HudsonAlpha/CSL_public_benchmark’s past year of commit activity
    Shell 18 Apache-2.0 0 0 0 Updated Feb 17, 2025
  • Generate-PRS Public
    HudsonAlpha/Generate-PRS’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 30, 2024
  • jasmine_sv_annotations Public

    A pipeline to merge 2 or more sample SV VCFs into a consensus set and annotate with frequency resources with merging via jasmine

    HudsonAlpha/jasmine_sv_annotations’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 19, 2024
  • Check-Concordance Public
    HudsonAlpha/Check-Concordance’s past year of commit activity
    Shell 0 0 0 0 Updated Aug 6, 2024
  • PRS-Pipeline Public Forked from dkim4624/PRS-Pipeline
    HudsonAlpha/PRS-Pipeline’s past year of commit activity
    R 0 1 0 0 Updated Jul 24, 2024
  • igv-grapher Public

    Given a BED file and either a bed file of genomic regions or VCF of structural variant calls, use IGV in headless mode to make graphs.

    HudsonAlpha/igv-grapher’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jul 24, 2024
View all repositories

Most used topics

Loading…