PBS_PAPER Project

Description

This project contains the scripts and supplementary documents used for the analyses in the "PBS_PAPER" paper. The repository is organized into three main folders to facilitate navigation and use of resources:

Supplement: Supplementary documents for the paper.
Scripts: Source codes for the analyses.
Support: Project-related documentation.

Project Structure

Requirements

To run the scripts in this project, you need to have Python 3.12 installed. Additional dependencies are listed in the requirements.txt file.

Installing Dependencies

You can install all the necessary dependencies using the following command:

pip install -r requirements.txt

Data

The data used in the analyses for this project are available in our other conversation named "PBS_PAPER". Make sure the data are organized as described in the documentation within the Support folder.

Running the Scripts

To run the scripts, navigate to the Scripts folder and execute the desired script. For example:

cd Scripts
python analysis1.py

Make sure to adjust the file paths within the scripts as necessary.

Documentation

Detailed documentation about the project, including usage instructions, descriptions of the analyses, and other relevant details, can be found in the Support folder.

Contact

For questions or more information, please contact Andre Rico.

HallLab/pbs_igem

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