Rework Fortran configure to allow cross compile overrides

.github/workflows/cmake.yml

@@ -84,6 +84,12 @@ jobs:
             thread_safety: ""
             build_mode: "Debug"
 
+    call-release-cross:
+        name: "CMake Release Cross Compile Workflows"
+        uses: ./.github/workflows/cross-compile.yml
+        with:
+            build_mode: "Release"
+
     call-release-cmake:
         name: "CMake Release Workflows"
         uses: ./.github/workflows/main-cmake.yml

.github/workflows/cross-compile.yml

@@ -0,0 +1,93 @@
+name: hdf5 dev CMake CI
+
+# Triggers the workflow on a call from another workflow
+on:
+  workflow_call:
+    inputs:
+      build_mode:
+        description: "release vs. debug build"
+        required: true
+        type: string
+
+permissions:
+  contents: read
+
+jobs:
+  build_and_test_linux:
+    name: "Ubuntu mingw64-${{ inputs.build_mode }}"
+    runs-on: ubuntu-24.04
+    steps:
+      - name: Install CMake Dependencies (Linux)
+        run: |
+          sudo apt-get update
+          sudo apt-get install ninja-build graphviz
+          sudo apt install libssl3 libssl-dev libcurl4 libcurl4-openssl-dev
+          sudo apt-get install -y mingw-w64
+          sudo apt-get install gfortran-mingw-w64-x86-64-win32
+
+      - name: Install Dependencies
+        uses: ssciwr/doxygen-install@v1
+        with:
+          version: "1.13.2"
+
+      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+      - name: Get Sources
+        uses: actions/[email protected]
+
+      # CMAKE CONFIGURE
+      - name: CMake Configure
+        run: |
+           mkdir "${{ runner.workspace }}/build"
+           cd "${{ runner.workspace }}/build"
+           cmake -C $GITHUB_WORKSPACE/config/cmake/cacheinit.cmake \
+             -G Ninja \
+             --log-level=VERBOSE \
+             -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/mingw64.cmake \
+             -DCMAKE_BUILD_TYPE=${{ inputs.build_mode }} \
+             -DHDF5_ENABLE_DOXY_WARNINGS:BOOL=ON \
+             -DHDF5_BUILD_DOC:BOOL=ON \
+             -DHDF5_BUILD_JAVA:BOOL=OFF \
+             -DHDF5_ENABLE_PLUGIN_SUPPORT:BOOL=OFF \
+             -DHDF5_ENABLE_ZLIB_SUPPORT:BOOL=ON \
+             -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON \
+             -DLIBAEC_USE_LOCALCONTENT:BOOL=OFF \
+             -DZLIB_USE_LOCALCONTENT:BOOL=OFF \
+             -DHDF5_PACK_EXAMPLES:BOOL=ON \
+             -DHDF5_PACKAGE_EXTLIBS:BOOL=ON \
+             -DHDF5_TEST_API:BOOL=OFF \
+             -DHDF5_USE_PREGEN:BOOL=ON \
+             -DHDF5_USE_PREGEN_DIR:PATH=$GITHUB_WORKSPACE/config/fortpregen/gfortran \
+             $GITHUB_WORKSPACE
+        shell: bash
+
+      # BUILD
+      - name: CMake Build
+        run: cmake --build . --parallel 3 --config ${{ inputs.build_mode }}
+        working-directory: ${{ runner.workspace }}/build
+
+      # RUN TESTS
+      - name: CMake Run Tests
+        run: ctest . --parallel 2 -C ${{ inputs.build_mode }} -V -E "err_compat|filenotclosed|swmr|cache_api"
+        working-directory: ${{ runner.workspace }}/build
+
+      # RUN Failing TESTS
+      - name: CMake Run Tests
+        run: ctest . --parallel 2 -C ${{ inputs.build_mode }} -V -R "err_compat|filenotclosed|swmr|cache_api"
+        working-directory: ${{ runner.workspace }}/build
+        continue-on-error: true
+
+      - name: CMake Run Package
+        run: cpack -C ${{ inputs.build_mode }} -V
+        working-directory: ${{ runner.workspace }}/build
+
+      - name: List files in the space
+        run: |
+               ls -l ${{ runner.workspace }}/build
+
+      - name: Save published binary (linux)
+        uses: actions/upload-artifact@v4
+        with:
+          name: tgz-ubuntu-2404_mingw64-${{ inputs.build_mode }}-binary
+          path: ${{ runner.workspace }}/build/HDF5-*-Linux.tar.gz
+          if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
+        if:  ${{ inputs.build_mode != 'Debug' }}

CMakeLists.txt

@@ -325,6 +325,12 @@ set (HDF5_DOXYGEN_DIR              ${HDF5_SOURCE_DIR}/doxygen)
 
 set (HDF5_SRC_INCLUDE_DIRS ${HDF5_SRC_DIR})
 
+if (HDF5_USE_PREGEN)
+  set (HDF5_GENERATED_SOURCE_DIR ${HDF5_USE_PREGEN_DIR})
+else ()
+  set (HDF5_GENERATED_SOURCE_DIR ${HDF5_F90_SRC_BINARY_DIR})
+endif ()
+
 #-----------------------------------------------------------------------------
 # parse the full version number from H5public.h and include in H5_VERS_INFO
 #-----------------------------------------------------------------------------

HDF5Examples/C/H5D/CMakeLists.txt

@@ -222,13 +222,15 @@ if (H5EX_BUILD_TESTING)
             ${testname}.h5
     )
     if (HDF5_ENABLE_USING_MEMCHECKER)
-      add_test (NAME ${EXAMPLE_VARNAME}_${testname} COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:${EXAMPLE_VARNAME}_${testname}>)
-      set_tests_properties (${EXAMPLE_VARNAME}_${testname} PROPERTIES DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall)
+      add_test (NAME ${EXAMPLE_VARNAME}_${testname} COMMAND $<TARGET_FILE:${EXAMPLE_VARNAME}_${testname}>)
+      set_tests_properties (${EXAMPLE_VARNAME}_${testname} PROPERTIES
+          DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall
+          ENVIRONMENT "${CROSSCOMPILING_PATH}"
+      )
     else ()
       add_test (
           NAME ${EXAMPLE_VARNAME}_${testname}
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
               -D "TEST_PROGRAM=$<TARGET_FILE:${EXAMPLE_VARNAME}_${testname}>"
               -D "TEST_ARGS:STRING="
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -238,12 +240,14 @@ if (H5EX_BUILD_TESTING)
               -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_LIB_DIRECTORY}"
               -P "${H5EX_RESOURCES_DIR}/runTest.cmake"
       )
-      set_tests_properties (${EXAMPLE_VARNAME}_${testname} PROPERTIES DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall)
+      set_tests_properties (${EXAMPLE_VARNAME}_${testname} PROPERTIES
+          DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall
+          ENVIRONMENT "${CROSSCOMPILING_PATH}"
+      )
       if (HDF5_PROVIDES_TOOLS)
         add_test (
             NAME ${EXAMPLE_VARNAME}_H5DUMP-${testname}
             COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
                 -D "TEST_PROGRAM=${H5EX_HDF5_DUMP_EXECUTABLE}"
                 -D "TEST_ARGS:STRING=${ARGN};${testname}.h5"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -253,7 +257,10 @@ if (H5EX_BUILD_TESTING)
                 -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_LIB_DIRECTORY}"
                 -P "${H5EX_RESOURCES_DIR}/runTest.cmake"
         )
-        set_tests_properties (${EXAMPLE_VARNAME}_H5DUMP-${testname} PROPERTIES DEPENDS ${EXAMPLE_VARNAME}_${testname})
+        set_tests_properties (${EXAMPLE_VARNAME}_H5DUMP-${testname} PROPERTIES
+            DEPENDS ${EXAMPLE_VARNAME}_${testname}
+            ENVIRONMENT "${CROSSCOMPILING_PATH}"
+        )
       endif ()
     endif ()
   endmacro ()

HDF5Examples/C/H5FLT/CMakeLists.txt

@@ -212,7 +212,6 @@ if (H5EX_BUILD_TESTING)
       add_test (
           NAME ${EXAMPLE_VARNAME}_${testname}-ERR
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
               -D "TEST_PROGRAM=$<TARGET_FILE:${EXAMPLE_VARNAME}_${testname}>"
               -D "TEST_ARGS:STRING=${ARGN}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -228,7 +227,10 @@ if (H5EX_BUILD_TESTING)
               -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_LIB_DIRECTORY}"
               -P "${H5EX_RESOURCES_DIR}/runTest.cmake"
       )
-      set_tests_properties (${EXAMPLE_VARNAME}_${testname}-ERR PROPERTIES DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall)
+      set_tests_properties (${EXAMPLE_VARNAME}_${testname}-ERR PROPERTIES
+          DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall
+          ENVIRONMENT "${CROSSCOMPILING_PATH}"
+      )
       add_test (
           NAME ${EXAMPLE_VARNAME}_${testname}
           COMMAND "${CMAKE_COMMAND}"
@@ -240,7 +242,6 @@ if (H5EX_BUILD_TESTING)
       add_test (
           NAME ${EXAMPLE_VARNAME}_${testname}
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
               -D "TEST_PROGRAM=$<TARGET_FILE:${EXAMPLE_VARNAME}_${testname}>"
               -D "TEST_ARGS:STRING=${ARGN}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -252,15 +253,17 @@ if (H5EX_BUILD_TESTING)
               -D "TEST_LIBRARY_DIRECTORY=${CMAKE_TEST_LIB_DIRECTORY}"
               -P "${H5EX_RESOURCES_DIR}/runTest.cmake"
       )
-      set_tests_properties (${EXAMPLE_VARNAME}_${testname} PROPERTIES DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall)
+      set_tests_properties (${EXAMPLE_VARNAME}_${testname} PROPERTIES
+          DEPENDS ${EXAMPLE_VARNAME}_${testname}-clearall
+          ENVIRONMENT "${CROSSCOMPILING_PATH}"
+      )
     endif ()
     set (last_test "${EXAMPLE_VARNAME}_${testname}")
     if (HDF5_PROVIDES_TOOLS)
       if ("${ARGN}" STREQUAL "FILTERALL")
         add_test (
             NAME ${EXAMPLE_VARNAME}_H5DUMP-${testname}
             COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
                 -D "TEST_PROGRAM=${H5EX_HDF5_DUMP_EXECUTABLE}"
                 -D "TEST_ARGS:STRING=--enable-error-stack;-p;${testname}.h5"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -278,7 +281,6 @@ if (H5EX_BUILD_TESTING)
         add_test (
             NAME ${EXAMPLE_VARNAME}_H5DUMP-${testname}
             COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
                 -D "TEST_PROGRAM=${H5EX_HDF5_DUMP_EXECUTABLE}"
                 -D "TEST_ARGS:STRING=--enable-error-stack;-pH;${testname}.h5"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -296,7 +298,6 @@ if (H5EX_BUILD_TESTING)
         add_test (
             NAME ${EXAMPLE_VARNAME}_H5DUMP-${testname}
             COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
                 -D "TEST_PROGRAM=${H5EX_HDF5_DUMP_EXECUTABLE}"
                 -D "TEST_ARGS:STRING=--enable-error-stack;-p;${testname}.h5"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
@@ -311,7 +312,10 @@ if (H5EX_BUILD_TESTING)
                 -P "${H5EX_RESOURCES_DIR}/runTest.cmake"
         )
       endif ()
-      set_tests_properties (${EXAMPLE_VARNAME}_H5DUMP-${testname} PROPERTIES DEPENDS ${EXAMPLE_VARNAME}_${testname})
+      set_tests_properties (${EXAMPLE_VARNAME}_H5DUMP-${testname} PROPERTIES
+          DEPENDS ${EXAMPLE_VARNAME}_${testname}
+          ENVIRONMENT "${CROSSCOMPILING_PATH}"
+      )
       set (last_test "${EXAMPLE_VARNAME}_H5DUMP-${testname}")
     endif ()
   endmacro ()
@@ -320,17 +324,17 @@ if (H5EX_BUILD_TESTING)
   # Copy all the HDF5 files from the source directory into the test directory
   # --------------------------------------------------------------------
   foreach (h5_file ${dyn_examples})
-    HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/tfiles/${h5_file}.tst" "${PROJECT_BINARY_DIR}/${h5_file}.tst" "example_files")
+    HDFTEST_COPY_FILE ("${PROJECT_SOURCE_DIR}/tfiles/${h5_file}.tst" "${PROJECT_BINARY_DIR}/${h5_file}.tst" "example_files")
     if (WIN32 AND MSVC_VERSION LESS 1900 AND ${h5_file} MATCHES "h5ex_d_zfp")
-      HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/tfiles/h5ex_d_zfp.wddl" "${PROJECT_BINARY_DIR}/h5ex_d_zfp.ddl" "example_files")
+      HDFTEST_COPY_FILE ("${PROJECT_SOURCE_DIR}/tfiles/h5ex_d_zfp.wddl" "${PROJECT_BINARY_DIR}/h5ex_d_zfp.ddl" "example_files")
     else ()
-      HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/tfiles/${h5_file}.ddl" "${PROJECT_BINARY_DIR}/${h5_file}.ddl" "example_files")
+      HDFTEST_COPY_FILE ("${PROJECT_SOURCE_DIR}/tfiles/${h5_file}.ddl" "${PROJECT_BINARY_DIR}/${h5_file}.ddl" "example_files")
     endif()
   endforeach ()
   foreach (h5_file ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
-    HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/tfiles/${h5_file}" "${PROJECT_BINARY_DIR}/${h5_file}" "example_files")
+    HDFTEST_COPY_FILE ("${PROJECT_SOURCE_DIR}/tfiles/${h5_file}" "${PROJECT_BINARY_DIR}/${h5_file}" "example_files")
   endforeach ()
-  add_custom_target(${EXAMPLE_VARNAME}_example_files ALL COMMENT "Copying files needed by example tests" DEPENDS ${example_files_list})
+  add_custom_target (${EXAMPLE_VARNAME}_example_files ALL COMMENT "Copying files needed by example tests" DEPENDS ${example_files_list})
 
   foreach (h5_file ${dyn_examples})
     if (NOT HDF5_ENABLE_USING_MEMCHECKER)