introduce variable `$EESSI_INIT_PREFIX` for overriding location of `init` directory #93

bedroge · 2025-09-29T07:55:09Z

This doesn't change any default behavior, but it's needed for the RISC-V bot: RISC-V software is built for /cvmfs/dev.eessi.io/riscv, while using the compat layer and scripts from software.eessi.io. $EESSI_PREFIX is a bit ambiguous in that case, and is currently pointing to /cvmfs/dev.eessi.io/riscv, meaning that the EESSI-extend module will also look there for the init dir (that's where it expects the EB hooks file). This new variable allows us to to override that location.

These two changes were tested in EESSI/dev.eessi.io-riscv#1 (comment), along with some additional changes in https://github.com/EESSI/dev.eessi.io-scripts/blob/main/bot/bot-build-dev.eessi.io.slurm (this needs to actually set that variable).

edit: though not really required, I figured it would be clean to have the EESSI module set EESSI_INIT_PREFIX as well, so I've added that in 1ff11e3. For consistency, I also renamed the local variable eessi_archdetect_prefix to eessi_init_prefix.

…refix

bedroge · 2025-09-29T08:22:15Z

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2

eessi-bot-aws · 2025-09-29T08:22:22Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2023.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2025.09/pr_93/93291

date	job status	comment
Sep 29 08:22:21 UTC 2025	submitted	job id `93291` awaits release by job manager
Sep 29 08:22:51 UTC 2025	released	job awaits launch by Slurm scheduler
Sep 29 08:28:57 UTC 2025	running	job `93291` is running
Sep 29 08:33:02 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-93291.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-17591345710.tar.gz` size: 0 MiB (53615 bytes) entries: 14 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `EESSI-extend/2023.06-easybuild.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `EESSI-extend/2023.06-easybuild` reprod directories under 2023.06/software/linux/x86_64/amd/zen2/reprod no reprod directories in tarball other under 2023.06/software/linux/x86_64/amd/zen2 `2023.06/init/modules/EESSI/2023.06.lua`
Sep 29 08:33:02 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:x86_64_amd_zen2+default P: perf: 430.429 timesteps/s (r:0, l:None, u:None) [ OK ] ( 2/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_amd_zen2+default P: perf: 441.576 timesteps/s (r:0, l:None, u:None) [ OK ] ( 3/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_amd_zen2+default P: latency: 1.8 us (r:0, l:None, u:None) [ OK ] ( 4/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_amd_zen2+default P: latency: 1.91 us (r:0, l:None, u:None) [ OK ] ( 5/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_amd_zen2+default P: latency: 3.96 us (r:0, l:None, u:None) [ OK ] ( 6/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_amd_zen2+default P: latency: 4.22 us (r:0, l:None, u:None) [ OK ] ( 7/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_amd_zen2+default P: latency: 0.6 us (r:0, l:None, u:None) [ OK ] ( 8/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_amd_zen2+default P: latency: 0.58 us (r:0, l:None, u:None) [ OK ] ( 9/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_amd_zen2+default P: bandwidth: 7310.49 MB/s (r:0, l:None, u:None) [ OK ] (10/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_amd_zen2+default P: bandwidth: 7254.37 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-93291.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

eessi-bot-aws · 2025-09-29T08:22:27Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2025.09/pr_93/93292

date	job status	comment
Sep 29 08:22:26 UTC 2025	submitted	job id `93292` awaits release by job manager
Sep 29 08:22:49 UTC 2025	released	job awaits launch by Slurm scheduler
Sep 29 08:23:54 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-93292.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen2-17591342220.tar.gz` size: 0 MiB (45067 bytes) entries: 14 modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all `EESSI-extend/2025.06-easybuild.lua` software under 2025.06/software/linux/x86_64/amd/zen2/software `EESSI-extend/2025.06-easybuild` reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod no reprod directories in tarball other under 2025.06/software/linux/x86_64/amd/zen2 `2025.06/init/modules/EESSI/2025.06.lua`
Sep 29 08:23:54 UTC 2025	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-93292.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

bedroge · 2025-09-29T13:58:49Z

Removed the ready-to-deploy label, need to do a similar change to the bash init scripts (that's what the CI is complaining about).

bedroge · 2025-09-29T14:48:37Z

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2

eessi-bot-aws · 2025-09-29T14:48:43Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2023.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2025.09/pr_93/93311

date	job status	comment
Sep 29 14:48:42 UTC 2025	submitted	job id `93311` awaits release by job manager
Sep 29 14:49:15 UTC 2025	released	job awaits launch by Slurm scheduler
Sep 29 14:54:21 UTC 2025	running	job `93311` is running
Sep 29 14:59:30 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-93311.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-17591577350.tar.gz` size: 0 MiB (54061 bytes) entries: 15 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `EESSI-extend/2023.06-easybuild.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `EESSI-extend/2023.06-easybuild` reprod directories under 2023.06/software/linux/x86_64/amd/zen2/reprod no reprod directories in tarball other under 2023.06/software/linux/x86_64/amd/zen2 `2023.06/init/eessi_defaults` `2023.06/init/modules/EESSI/2023.06.lua`
Sep 29 14:59:30 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:x86_64_amd_zen2+default P: perf: 441.608 timesteps/s (r:0, l:None, u:None) [ OK ] ( 2/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_amd_zen2+default P: perf: 445.467 timesteps/s (r:0, l:None, u:None) [ OK ] ( 3/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_amd_zen2+default P: latency: 2.09 us (r:0, l:None, u:None) [ OK ] ( 4/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_amd_zen2+default P: latency: 1.76 us (r:0, l:None, u:None) [ OK ] ( 5/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_amd_zen2+default P: latency: 3.97 us (r:0, l:None, u:None) [ OK ] ( 6/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_amd_zen2+default P: latency: 4.05 us (r:0, l:None, u:None) [ OK ] ( 7/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_amd_zen2+default P: latency: 0.58 us (r:0, l:None, u:None) [ OK ] ( 8/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_amd_zen2+default P: latency: 0.59 us (r:0, l:None, u:None) [ OK ] ( 9/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_amd_zen2+default P: bandwidth: 7395.56 MB/s (r:0, l:None, u:None) [ OK ] (10/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_amd_zen2+default P: bandwidth: 7437.27 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-93311.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

eessi-bot-aws · 2025-09-29T14:48:48Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2025.09/pr_93/93312

date	job status	comment
Sep 29 14:48:47 UTC 2025	submitted	job id `93312` awaits release by job manager
Sep 29 14:49:13 UTC 2025	released	job awaits launch by Slurm scheduler
Sep 29 14:54:19 UTC 2025	running	job `93312` is running
Sep 29 14:55:24 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-93312.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen2-17591576820.tar.gz` size: 0 MiB (45595 bytes) entries: 15 modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all `EESSI-extend/2025.06-easybuild.lua` software under 2025.06/software/linux/x86_64/amd/zen2/software `EESSI-extend/2025.06-easybuild` reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod no reprod directories in tarball other under 2025.06/software/linux/x86_64/amd/zen2 `2025.06/init/eessi_defaults` `2025.06/init/modules/EESSI/2025.06.lua`
Sep 29 14:55:24 UTC 2025	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-93312.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

bedroge · 2025-09-30T07:19:38Z

Tested the additional changes in the init scripts with the EESSI container on a RISC-V system:

2023.06:

Singularity> source /cvmfs/software.eessi.io/versions/2023.06/init/bash
RISC-V architecture detected, but there is no RISC-V support yet in the production repository.
Automatically switching to version 20240402 of the RISC-V development repository /cvmfs/riscv.eessi.io.
For more details about this repository, see https://www.eessi.io/docs/repositories/riscv.eessi.io/.

Found EESSI repo @ /cvmfs/riscv.eessi.io/versions/20240402!
archdetect says riscv64/generic
archdetect could not detect any accelerators
Using riscv64/generic as software subdirectory.
Found Lmod configuration file at /cvmfs/riscv.eessi.io/versions/20240402/software/linux/riscv64/generic/.lmod/lmodrc.lua
Found Lmod SitePackage.lua file at /cvmfs/riscv.eessi.io/versions/20240402/software/linux/riscv64/generic/.lmod/SitePackage.lua
Using /cvmfs/riscv.eessi.io/host_injections/20240402/software/linux/riscv64/generic as the site extension directory for installations.
Using  as the site extension directory for accelerated installations.
Using /cvmfs/riscv.eessi.io/versions/20240402/software/linux/riscv64/generic/modules/all as the directory to be added to MODULEPATH.
Using /cvmfs/riscv.eessi.io/host_injections/20240402/software/linux/riscv64/generic/modules/all as the site extension directory to be added to MODULEPATH.
Initializing Lmod...
Prepending /cvmfs/riscv.eessi.io/versions/20240402/software/linux/riscv64/generic/modules/all to $MODULEPATH...
Prepending site path /cvmfs/riscv.eessi.io/host_injections/20240402/software/linux/riscv64/generic/modules/all to $MODULEPATH...
Environment set up to use EESSI (20240402), have fun!

{EESSI 20240402} Singularity> echo $EESSI_INIT_PREFIX
/cvmfs/riscv.eessi.io/versions/20240402/init

2025.06:

Singularity> source /cvmfs/software.eessi.io/versions/2025.06/init/bash
This EESSI production version only provides a RISC-V compatibility layer,
software installations are provided by the EESSI development repository at /cvmfs/dev.eessi.io/riscv.
Found EESSI repo @ /cvmfs/dev.eessi.io/riscv/versions/2025.06!
archdetect says riscv64/generic
archdetect could not detect any accelerators
Using riscv64/generic as software subdirectory.
ERROR: Lmod configuration file not found at /cvmfs/dev.eessi.io/riscv/versions/2025.06/software/linux/riscv64/generic/.lmod/lmodrc.lua
ERROR: Lmod SitePackage.lua file not found at /cvmfs/dev.eessi.io/riscv/versions/2025.06/software/linux/riscv64/generic/.lmod/SitePackage.lua
Using /cvmfs/dev.eessi.io/riscv/host_injections/2025.06/software/linux/riscv64/generic as the site extension directory for installations.
Using  as the site extension directory for accelerated installations.
ERROR: EESSI module path at /cvmfs/dev.eessi.io/riscv/versions/2025.06/software/linux/riscv64/generic/modules/all not found!
Initializing Lmod...
Prepending /cvmfs/dev.eessi.io/riscv/versions/2025.06/software/linux/riscv64/generic/modules/all to $MODULEPATH...
Prepending site path  to $MODULEPATH...
Environment set up to use EESSI (2025.06), have fun!

{EESSI 2025.06} Singularity> echo $EESSI_INIT_PREFIX
/cvmfs/software.eessi.io/versions/2025.06/init

2025.06-1:

Singularity> export EESSI_VERSION_OVERRIDE=2025.06-1
Singularity> source /cvmfs/software.eessi.io/versions/2025.06/init/bash
This EESSI production version only provides a RISC-V compatibility layer,
software installations are provided by the EESSI development repository at /cvmfs/dev.eessi.io/riscv.
Found EESSI repo @ /cvmfs/dev.eessi.io/riscv/versions/2025.06-1!
archdetect says riscv64/generic
archdetect could not detect any accelerators
Using riscv64/generic as software subdirectory.
ERROR: Lmod configuration file not found at /cvmfs/dev.eessi.io/riscv/versions/2025.06-1/software/linux/riscv64/generic/.lmod/lmodrc.lua
ERROR: Lmod SitePackage.lua file not found at /cvmfs/dev.eessi.io/riscv/versions/2025.06-1/software/linux/riscv64/generic/.lmod/SitePackage.lua
Using /cvmfs/dev.eessi.io/riscv/host_injections/2025.06-1/software/linux/riscv64/generic as the site extension directory for installations.
Using  as the site extension directory for accelerated installations.
ERROR: EESSI module path at /cvmfs/dev.eessi.io/riscv/versions/2025.06-1/software/linux/riscv64/generic/modules/all not found!
Initializing Lmod...
Prepending /cvmfs/dev.eessi.io/riscv/versions/2025.06-1/software/linux/riscv64/generic/modules/all to $MODULEPATH...
Prepending site path  to $MODULEPATH...
Environment set up to use EESSI (2025.06-1), have fun!

{EESSI 2025.06-1} Singularity> echo $EESSI_INIT_PREFIX
/cvmfs/software.eessi.io/versions/2025.06/init

bedroge added 3 commits September 29, 2025 09:49

forward EESSI_INIT_PREFIX variable if it's set

5a99ee0

EESSI_INIT_PREFIX for overriding location of EB hooks

5c85b38

set EESSI_INIT_PREFIX, rename eessi_archdetect_prefix to eessi_init_p…

1ff11e3

…refix

bedroge added ready-to-deploy 2025.06-software.eessi.io 2025.06 version of software.eessi.io 2023.06-software.eessi.io 2023.06 version of software.eessi.io and removed ready-to-deploy labels Sep 29, 2025

bedroge added 3 commits September 29, 2025 16:28

distinguish between different versions for RISC-V clients

aecc722

set EESSI_INIT_PREFIX

b9b06da

small fix in if statement, prevent override from being set by default

2ae6dab

bedroge mentioned this pull request Sep 30, 2025

Test RISC-V builds EESSI/dev.eessi.io-riscv#1

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introduce variable `$EESSI_INIT_PREFIX` for overriding location of `init` directory #93

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introduce variable $EESSI_INIT_PREFIX for overriding location of init directory #93

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introduce variable `$EESSI_INIT_PREFIX` for overriding location of `init` directory #93

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