Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
PR only to share the code and testing for upg.
This shows implementation of the case where the mean of the breeding value in the base population is not zero and the first individual in the base population's breeding value is not equal to the mean of their offspring. Here a warning will be printed to the user, referring them to a vignette (in progress), but AlphaPart will still run.
In the test_that file, I added a pedigree with two upgs and tested implementation with one and two traits.
Other actions (including error handling) will be updated in issue #7