AllenCellModeling · donovanr · Oct 1, 2020 · Oct 21, 2020 · Feb 3, 2021 · Feb 3, 2021
diff --git a/.gitignore b/.gitignore
@@ -1,7 +1,9 @@
+.nfs*
 .DS_Store
 ._.DS_Store
 **.pyc
 **.pyt
+*.png
 .ipynb_checkpoints
 .vscode
 .bash_history

diff --git a/examples/latent_variation.ipynb b/examples/latent_variation.ipynb
@@ -399,7 +399,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.8"
+   "version": "3.7.6"
   }
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  "nbformat": 4,

diff --git a/examples/loading_models.ipynb b/examples/loading_models.ipynb
@@ -121,7 +121,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.8"
+   "version": "3.7.6"
   }
  },
  "nbformat": 4,

diff --git a/examples/paper_plos_2020/1_model_compare_2D.ipynb b/examples/paper_plos_2020/1_model_compare_2D.ipynb
diff --git a/examples/paper_plos_2020/2_model_compare_3D.ipynb b/examples/paper_plos_2020/2_model_compare_3D.ipynb
@@ -647,7 +647,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.8"
+   "version": "3.7.6"
   }
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  "nbformat": 4,

diff --git a/examples/paper_plos_2020/3_ELBO_demo 3D_single_channel.ipynb b/examples/paper_plos_2020/3_ELBO_demo 3D_single_channel.ipynb
diff --git a/examples/paper_plos_2020/4_ELBO_ablation.ipynb b/examples/paper_plos_2020/4_ELBO_ablation.ipynb
@@ -1168,7 +1168,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.8"
+   "version": "3.7.6"
   }
  },
  "nbformat": 4,

diff --git a/examples/paper_plos_2020/5_drug_embedding.ipynb b/examples/paper_plos_2020/5_drug_embedding.ipynb
diff --git a/examples/paper_plos_2020/6_3D_cell_mage_printing.ipynb b/examples/paper_plos_2020/6_3D_cell_mage_printing.ipynb
diff --git a/examples/paper_plos_2020/6b_3D_cell_image_printing_all.ipynb b/examples/paper_plos_2020/6b_3D_cell_image_printing_all.ipynb