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Created flat family testing history script #242

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Created flat family testing history script #242

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3678187
Created flat family testing history script
jecihjoy Dec 21, 2020
6ae1893
Added flat family testing script to airflow
jecihjoy Dec 21, 2020
60eaa40
Improvements to family testing script
jecihjoy Feb 1, 2021
d628eed
HIV-709 Additional miising columns to patients contact listing
jecihjoy Mar 12, 2021
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26 changes: 20 additions & 6 deletions airflow/dags/test_new_etl_scripts.py
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Original file line number Diff line number Diff line change
Expand Up @@ -113,7 +113,7 @@ def execute(self, context):

update_hiv_summary = MySqlOperator(
task_id='update_hiv_summary',
sql='generate_flat_hiv_summary("sync",1,15000,20);',
sql='call generate_flat_hiv_summary("sync",1,15000,20);',
mysql_conn_id=MYSQL_CONN_ID,
database='etl',
dag=dag
Expand Down Expand Up @@ -151,6 +151,14 @@ def execute(self, context):
dag=dag
)

update_flat_family_testing = MySqlOperator(
task_id='update_flat_family_testing',
sql='CALL etl.generate_flat_family_testing("sync",1,15000,20);',
mysql_conn_id=MYSQL_CONN_ID,
database='etl',
dag=dag
)

update_pep_summary = MySqlOperator(
task_id='update_pep_summary',
sql='call generate_pep_summary();',
Expand Down Expand Up @@ -207,8 +215,13 @@ def execute(self, context):
dag=dag
)



update_hei_summary = MySqlOperator(
task_id='update_hei_summary',
sql='CALL `etl`.`generate_flat_hei_summary_v1_0`("sync",1,10000,1);',
mysql_conn_id=MYSQL_CONN_ID,
database='etl',
dag=dag
)
finish = DummyOperator(
task_id='finish',
dag=dag
Expand Down Expand Up @@ -267,11 +280,12 @@ def decide_to_run_cdm_summary():
#wait_for_base_tables >> update_vitals


update_hiv_summary >> update_appointments >> update_onc_tables >> update_pep_summary >> cdm_branch
update_hiv_summary >> update_flat_covid >> update_case_management >> cdm_branch
update_hiv_summary >> update_appointments >> update_onc_tables >> update_pep_summary >> cdm_branch
update_hiv_summary >> update_flat_covid >> update_case_management >> update_hei_summary >> cdm_branch
cdm_branch >> update_cdm_summary >> update_defaulters >> update_vitals >> finish
cdm_branch >> finish
update_flat_labs_and_imaging >> finish
update_flat_labs_and_imaging >> update_flat_family_testing
update_flat_family_testing >> finish
#update_vitals >> finish


Expand Down
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