diff --git a/qa-prometheus.planx-pla.net/metadata/aggregate_config.json b/qa-prometheus.planx-pla.net/metadata/aggregate_config.json index 4a418329b..9c24f20b9 100644 --- a/qa-prometheus.planx-pla.net/metadata/aggregate_config.json +++ b/qa-prometheus.planx-pla.net/metadata/aggregate_config.json @@ -62,6 +62,17 @@ "type": "array" }, "subject_chemical_agents_of_exposure": {}, + "subject_run_id": {}, + "subject_class": {}, + "subject_group": {}, + "subject_project": {}, + "subject_rundate": {}, + "subject_exp_target": {}, + "subject_ionization": {}, + "subject_chromatography": {}, + "subject_plate": {}, + "subject_injection": {}, + "subject_plate_position": {}, "mc2dp_global_id": {}, "data_files": { "type": "array" @@ -244,6 +255,38 @@ "is_synthetic": "No", "data_files": "path:data_type" } + }, + "PNNL-subject-level-metadata": { + "mds_url": "https://externalgen3.prometheus.data-commons.org/", + "commons_url": "externalgen3.prometheus.data-commons.org", + "adapter": "gen3", + "config": { + "guid_type": "PNNL_subject_metadata", + "study_field": "gen3_discovery" + }, + "keep_original_fields": false, + "field_mappings": { + "authz": "", + "tags": "path:tags", + "_unique_id": "path:_unique_id", + "commons": "path:commons", + "subject_id": "path:sample_id", + "subject_run_id": "path:replicate_info.run_id", + "subject_class": "path:class", + "subject_group": "path:group", + "subject_project": "path:project", + "subject_rundate": "path:rundate", + "subject_exp_target": "path:exp_target", + "subject_ionization": "path:ionization", + "subject_chromatography": "path:chromatography", + "subject_plate": "path:replicate_info.plate", + "subject_injection": "path:replicate_info.injection", + "subject_plate_position": "path:replicate_info.plate_position", + "data_source": "path:data_source", + "mc2dp_global_id": "", + "is_synthetic": "Yes", + "commons_url": "externalgen3.prometheus.data-commons.org" + } } } } \ No newline at end of file