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add PNNL data source
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qa-prometheus.planx-pla.net/metadata/aggregate_config.json

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@@ -62,6 +62,17 @@
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"type": "array"
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},
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"subject_chemical_agents_of_exposure": {},
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"subject_run_id": {},
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"subject_class": {},
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"subject_group": {},
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"subject_project": {},
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"subject_rundate": {},
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"subject_exp_target": {},
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"subject_ionization": {},
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"subject_chromatography": {},
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"subject_plate": {},
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"subject_injection": {},
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"subject_plate_position": {},
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"mc2dp_global_id": {},
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"data_files": {
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"type": "array"
@@ -244,6 +255,38 @@
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"is_synthetic": "No",
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"data_files": "path:data_type"
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}
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},
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"PNNL-subject-level-metadata": {
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"mds_url": "https://externalgen3.prometheus.data-commons.org/",
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"commons_url": "externalgen3.prometheus.data-commons.org",
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"adapter": "gen3",
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"config": {
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"guid_type": "PNNL_subject_metadata",
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"study_field": "gen3_discovery"
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},
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"keep_original_fields": false,
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"field_mappings": {
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"authz": "",
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"tags": "path:tags",
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"_unique_id": "path:_unique_id",
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"commons": "path:commons",
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"subject_id": "path:sample_id",
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"subject_run_id": "path:replicate_info.run_id",
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"subject_class": "path:class",
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"subject_group": "path:group",
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"subject_project": "path:project",
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"subject_rundate": "path:rundate",
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"subject_exp_target": "path:exp_target",
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"subject_ionization": "path:ionization",
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"subject_chromatography": "path:chromatography",
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"subject_plate": "path:replicate_info.plate",
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"subject_injection": "path:replicate_info.injection",
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"subject_plate_position": "path:replicate_info.plate_position",
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"data_source": "path:data_source",
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"mc2dp_global_id": "",
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"is_synthetic": "Yes",
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"commons_url": "externalgen3.prometheus.data-commons.org"
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}
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}
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}
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}

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