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Try multiple workflows
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‎.workflowhub.yml‎

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workflows:
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- path: .
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- path: another_workflow

‎another_workflow/concat_two_files.ga‎

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{
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"a_galaxy_workflow": "true",
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"annotation": "",
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"creator": [
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{
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"class": "Person",
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"identifier": "",
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"name": "Finn Bacall"
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}
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],
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"format-version": "0.1",
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"license": "MIT",
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"name": "Concat two files",
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"steps": {
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"0": {
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"annotation": "",
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"content_id": null,
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"errors": null,
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"id": 0,
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"input_connections": {},
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"inputs": [
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{
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"description": "",
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"name": "input1"
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}
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],
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"label": "input1",
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"name": "Input dataset",
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"outputs": [],
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"position": {
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"bottom": 254.1999969482422,
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"y": 193
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},
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"tool_id": null,
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"tool_state": "{\"optional\": false}",
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"tool_version": null,
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"type": "data_input",
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"uuid": "7a90b91e-b143-4aa3-923d-fbcca5994d60",
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"workflow_outputs": [
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{
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"label": null,
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"output_name": "output",
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"uuid": "1a510a60-afcc-4491-911b-3519da79f22d"
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}
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},
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"1": {
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"id": 1,
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"input_connections": {},
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"inputs": [
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{
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"description": "",
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"name": "input2"
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}
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],
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"label": "input2",
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"name": "Input dataset",
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"outputs": [],
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},
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"tool_id": null,
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"tool_state": "{\"optional\": false}",
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"type": "data_input",
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"uuid": "baa13f22-7e0c-4533-b12c-7d31caf0c9b3",
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"workflow_outputs": [
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"uuid": "1ded3ee7-d176-4385-8d1e-09b74af213fe"
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}
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]
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},
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"2": {
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"annotation": "",
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"content_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cat/0.1.0",
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"errors": null,
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"input_connections": {
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"output_name": "output"
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},
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"queries_0|inputs2": {
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"id": 1,
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"output_name": "output"
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}
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},
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"inputs": [],
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"label": null,
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"name": "Concatenate datasets",
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"outputs": [
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{
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"name": "out_file1",
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"type": "input"
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}
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],
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"position": {
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},
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"post_job_actions": {},
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"tool_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cat/0.1.0",
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"tool_shed_repository": {
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"changeset_revision": "ddf54b12c295",
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"name": "text_processing",
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"owner": "bgruening",
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"tool_shed": "toolshed.g2.bx.psu.edu"
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},
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"tool_state": "{\"__input_ext\": \"txt\", \"chromInfo\": \"/opt/galaxy/tool-data/shared/ucsc/chrom/?.len\", \"inputs\": {\"__class__\": \"ConnectedValue\"}, \"queries\": [{\"__index__\": 0, \"inputs2\": {\"__class__\": \"ConnectedValue\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
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"tool_version": "0.1.0",
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"type": "tool",
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"uuid": "b2de7621-8ea3-4384-8f79-766ef38ebcfe",
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"workflow_outputs": [
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{
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"label": null,
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"output_name": "out_file1",
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"uuid": "cba40c62-d9bd-49e0-b636-48cfab67c107"
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}
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]
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}
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},
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"tags": [
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"cat"
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],
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"uuid": "94a9a580-75d1-434f-b2af-02017de43e23",
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"version": 1
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}

‎another_workflow/diagram.png‎

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‎another_workflow/ro-crate-metadata.json‎

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{
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"@context": "https://w3id.org/ro/crate/1.1/context",
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"@graph": [
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{
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"@id": "ro-crate-metadata.json",
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"@type": "CreativeWork",
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"about": {
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"@id": "./"
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},
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"conformsTo": {
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"@id": "https://w3id.org/ro/crate/1.1"
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}
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},
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{
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"@id": "./",
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"@type": "Dataset",
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"conformsTo": [
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{
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"@id": "https://w3id.org/ro/crate/1.1"
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},
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{
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"@id": "https://w3id.org/workflowhub/workflow-ro-crate/1.0"
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}
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],
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"mainEntity": {
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"@id": "concat_two_files.ga"
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},
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"author": [
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],
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"license": "MIT",
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"url": "https://github.com/seek4science/workflow-test-fixture-456",
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"version": 1,
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"name": "Concat two files via GHA - Another one",
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"description": "# workflow-test-fixture\r\nA workflow and associated files for use in SEEK's tests :)\r\n",
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"sdDatePublished": "2024-07-04 13:31:54 +0100",
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"hasPart": [
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"@id": "concat_two_files.ga"
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},
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{
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"@id": "diagram.png"
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}
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]
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},
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{
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"@id": "concat_two_files.ga",
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"@type": [
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"File",
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"SoftwareSourceCode",
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"ComputationalWorkflow"
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],
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"contentSize": 4813,
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"programmingLanguage": {
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},
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"image": {
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"@id": "diagram.png"
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},
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"dct:conformsTo": "https://bioschemas.org/profiles/ComputationalWorkflow/1.0-RELEASE/",
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"description": "# workflow-test-fixture\r\nA workflow and associated files for use in SEEK's tests :)\r\n",
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"name": "Concat two files",
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"keywords": "cat",
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"version": 1,
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"license": "https://spdx.org/licenses/MIT",
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"creator": {
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"@id": "#Finn%20Bacall"
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},
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"dateCreated": "2024-07-04T12:31:49Z",
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"dateModified": "2024-07-04T12:31:49Z",
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],
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"sdPublisher": {
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"@id": "http://about.workflowhub.eu"
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},
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{
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"@id": "diagram.png",
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"@type": [
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"File",
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],
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},
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{
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"@id": "#Finn Bacall",
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"@type": "Person",
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"name": "Finn Bacall"
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},
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{
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"@id": "#galaxy",
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"@type": "ComputerLanguage",
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"name": "Galaxy",
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"identifier": {
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"@id": "https://galaxyproject.org/"
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},
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"url": {
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"@id": "https://galaxyproject.org/"
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}
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},
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{
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"@id": "http://about.workflowhub.eu",
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"@type": "Organization",
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"name": "WorkflowHub",
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"url": "http://about.workflowhub.eu"
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}
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]
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}

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