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replace readme with markdown file and fix documentation link
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.cruft.json

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"package_folder": "psy_transect",
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"project_short_description": "Psyplot plugin for visualizing data along a transect",
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"keywords": "visualization,psyplot,ugrid,cf,climate models,vertical transect,earth system sciences,scikit-learn,pyinterp",
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"documentation_url": "https://psyplot.github.io/psy-transect",
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"documentation_url": "https://psyplot.github.io/psy-transect/",
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"use_markdown_for_documentation": "no",
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"ci_build_stage": "no",
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"use_cibuildwheel": "no",

README.md

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<!--
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SPDX-FileCopyrightText: 2021-2024 Helmholtz-Zentrum hereon GmbH
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SPDX-License-Identifier: CC-BY-4.0
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-->
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# psy-transect
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[![CI](https://codebase.helmholtz.cloud/psyplot/psy-transect/badges/main/pipeline.svg)](https://codebase.helmholtz.cloud/psyplot/psy-transect/-/pipelines?page=1&scope=all&ref=main)
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[![Code coverage](https://codebase.helmholtz.cloud/psyplot/psy-transect/badges/main/coverage.svg)](https://codebase.helmholtz.cloud/psyplot/psy-transect/-/graphs/main/charts)
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[![Latest Release](https://codebase.helmholtz.cloud/psyplot/psy-transect/-/badges/release.svg)](https://codebase.helmholtz.cloud/psyplot/psy-transect)
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<!-- TODO: uncomment the following line when the package is published at https://pypi.org -->
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<!-- [![PyPI version](https://img.shields.io/pypi/v/psy-transect.svg)](https://pypi.python.org/pypi/psy-transect/) -->
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[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
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[![Imports: isort](https://img.shields.io/badge/%20imports-isort-%231674b1?style=flat&labelColor=ef8336)](https://pycqa.github.io/isort/)
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[![PEP8](https://img.shields.io/badge/code%20style-pep8-orange.svg)](https://www.python.org/dev/peps/pep-0008/)
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[![Checked with mypy](http://www.mypy-lang.org/static/mypy_badge.svg)](http://mypy-lang.org/)
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<!-- TODO: uncomment the following line when the package is registered at https://api.reuse.software -->
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<!-- [![REUSE status](https://api.reuse.software/badge/codebase.helmholtz.cloud/psyplot/psy-transect)](https://api.reuse.software/info/codebase.helmholtz.cloud/psyplot/psy-transect) -->
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Psyplot plugin for visualizing data along a transect for exploratory data analysis
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## Installation
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Install this package in a dedicated python environment via
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```bash
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python -m venv venv
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source venv/bin/activate
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pip install psy-transect
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```
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To use this in a development setup, clone the [source code][source code] from
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gitlab, start the development server and make your changes::
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```bash
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git clone https://codebase.helmholtz.cloud/psyplot/psy-transect
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cd psy-transect
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python -m venv venv
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source venv/bin/activate
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make dev-install
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```
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More detailed installation and usage instructions may be found in the [docs][docs].
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[source code]: https://codebase.helmholtz.cloud/psyplot/psy-transect
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[docs]: https://psyplot.github.io/psy-transect/installation.html
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## Technical note
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This package has been generated from the template
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https://codebase.helmholtz.cloud/psyplot/psyplot-plugin-template.git.
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See the template repository for instructions on how to update the skeleton for
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this package.
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## License information
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Copyright © 2021-2024 Helmholtz-Zentrum hereon GmbH
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Code files in this repository are licensed under the
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LGPL-3.0-only, if not stated otherwise
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in the file.
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Documentation files in this repository are licensed under CC-BY-4.0, if not stated otherwise in the file.
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Supplementary and configuration files in this repository are licensed
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under CC0-1.0, if not stated otherwise
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in the file.
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Please check the header of the individual files for more detailed
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information.
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### License management
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License management is handled with [``reuse``](https://reuse.readthedocs.io/).
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If you have any questions on this, please have a look into the
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[contributing guide][contributing] or contact the maintainers of
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`psy-transect`.
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[contributing]: https://psyplot.github.io/psy-transect/contributing.html

README.rst

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pyproject.toml

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[project.urls]
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Homepage = 'https://codebase.helmholtz.cloud/psyplot/psy-transect'
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Documentation = "https://psyplot.github.io/psy-transect"
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Documentation = "https://psyplot.github.io/psy-transect/"
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Source = "https://codebase.helmholtz.cloud/psyplot/psy-transect"
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Tracker = "https://codebase.helmholtz.cloud/psyplot/psy-transect/issues/"
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