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Funke lab

Janelia Research Campus

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  1. gunpowder gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    Python 83 58

  2. lsd lsd Public

    🌈

    Python 59 37

  3. motile motile Public

    Multi-Object Tracker using Integer Linear Equations

    Python 37 5

  4. daisy daisy Public

    Block-wise task scheduling for large nD volumes.

    Python 32 18

  5. cellulus cellulus Public

    Unsupervised Instance Segmentation in Microscopy

    Python 23 2

  6. linajea linajea Public

    Python 18 7

Repositories

Showing 10 of 82 repositories
  • funtracks Public

    A data model for cell tracking with actions, undo history, and more!

    funkelab/funtracks’s past year of commit activity
    Python 2 BSD-3-Clause 1 33 0 Updated Jul 20, 2025
  • finn Public

    finn is (not) napari

    funkelab/finn’s past year of commit activity
    Python 3 BSD-3-Clause 2 62 3 Updated Jul 20, 2025
  • spatial_graph Public

    A spatial graph datastructure for python

    funkelab/spatial_graph’s past year of commit activity
    Python 6 MIT 2 5 0 Updated Jul 19, 2025
  • zspace Public
    funkelab/zspace’s past year of commit activity
    0 0 0 0 Updated Jul 19, 2025
  • gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    funkelab/gunpowder’s past year of commit activity
    Python 83 MIT 58 12 1 Updated Jul 18, 2025
  • sub_volume_renderer Public Forked from gyoge0/sub_volume_renderer
    funkelab/sub_volume_renderer’s past year of commit activity
    Python 0 1 0 0 Updated Jul 18, 2025
  • attrackt_experiments Public
    funkelab/attrackt_experiments’s past year of commit activity
    0 0 0 0 Updated Jul 15, 2025
  • quac Public

    Quantitative Attributions with Counterfactuals

    funkelab/quac’s past year of commit activity
    Python 2 MIT 0 3 1 Updated Jul 15, 2025
  • motile_tracker Public

    An application for interactive for tracking with motile

    funkelab/motile_tracker’s past year of commit activity
    Python 7 BSD-3-Clause 4 62 3 Updated Jul 15, 2025
  • funlib.persistence Public

    Interfaces for data (arrays and graphs) and storage formats (databases and file formats)

    funkelab/funlib.persistence’s past year of commit activity
    Python 5 MIT 12 7 1 Updated Jul 11, 2025
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