diff --git a/README.md b/README.md
index be51054..3566afd 100644
--- a/README.md
+++ b/README.md
@@ -15,26 +15,27 @@ It also makes parallelization relatively easy by allowing you to define each tar
 -   [A UA HPC account](https://uarizona.atlassian.net/wiki/spaces/UAHPC/pages/75990889/Account+Creation)
 -   Some familiarity with R, RStudio, the [`renv` pacakge](https://rstudio.github.io/renv/articles/renv.html), and the [`targets` package](https://books.ropensci.org/targets/)
 -   A GitHub account
+-   Some familiarity with creating new RStudio projects from git—<https://happygitwithr.com/> is a great place to get started
 
 ## To set-up:
 
-To get this bare-bones pipeline running on the HPC:
+### Overview
 
-1.  Click the “Use this template” button to create a repo under your own GitHub user name.
-2.  Modify the HPC group name in `_targets.R` and in `run.sh` to be your PI group.
-3.  [SSH into the UA HPC](https://uarizona.atlassian.net/wiki/spaces/UAHPC/pages/75990560/System+Access).
-4.  Clone this repo on the HPC, e.g. with `git clone https://github.com/your-user-name/targets-uahpc.git`.
-5.  Start an interactive session on the HPC, e.g. with `interactive -a <groupname>` .
-6.  Load R with `module load R`.
-7.  Launch R from within the `targets-uahpc/` directory with the `R` command
-8.  The [`renv` package](https://rstudio.github.io/renv/) should install itself. After it is done, you can install all necessary R packages by running `renv::restore()`.
+Below are some step-by-step instructions to create a GitHub repo from this template, clone your repo to the HPC, install necessary R packages, and modify some user-specific configuration.
+The set-up instructions take advantage of the RStudio GUI you can get with Open OnDemand, but you can use the command line if you're familiar with it.
+
+1.  On this page, click the “Use this template” button to create a repo under your own GitHub user name.
+2.  Start a new Open OnDemand RStudio session [here](https://ood.hpc.arizona.edu/pun/sys/dashboard/batch_connect/sys/UAz_rstudio/session_contexts/new) (you likely only need 1 or 2 cores for this)
+3.  Once RStudio launches in your browser, create a new project from your GitHub repository (E.g. using the [RStudio new project wizard](https://happygitwithr.com/existing-github-first#rstudio-ide-1)).
+4.  The [`renv` package](https://rstudio.github.io/renv/) should install itself and prompt you to run `renv::restore()` to install all needed packages.
+5.  Modify the HPC group name in `_targets.R` and in `run.sh` to be your PI group.
 
 To modify the pipeline to run *your* code, you'll need to edit the list of targets in `_targets.R` as well as functions in the `R/` folder.
 See the [targets manual](https://books.ropensci.org/targets/) for more information.
 
 Note that use of the `renv` package for tracking dependencies isn't strictly necessary, but it does simplify package installation on the HPC.
 As you add R packages dependencies, you can use `targets::tar_renv()` to update the `_targets_packages.R` file and then `renv::snapshot()` to add them to `renv.lock`.
-On the HPC, running `renv::restore()` not only installs any missing R packages, it also automatically detects system dependencies and lets you know if they aren't installed.
+On the HPC, running `renv::restore()` not only installs any missing R packages, it also automatically detects system dependencies and lets you know if they aren't installed or loaded.
 
 ## Running the pipeline
 
@@ -54,6 +55,9 @@ menu and navigate to the .Rproj file for this project.
 Then, from the console, run `targets::tar_make()` optionally with the `as_job = TRUE` argument to run it as a background process.
 You can occasionally check the progress of the pipeline in a variety of ways including `targets::tar_visnetwork()`.
 
+> [!NOTE] 
+> Open OnDemand doesn't support loading modules, so if your pipeline uses any R packages with system dependencies, you may not be able to use this method.
+
 ### From R
 
 SSH into the HPC, navigate to this project, and request an interactive session with `interactive -a <groupname> -t <HH:MM:SS>` where you replace the groupname with your group name, and the time stamp with how ever long you think the pipeline will take to run.
diff --git a/_targets_packages.R b/_targets_packages.R
index cb2b0d4..1ee6bf6 100644
--- a/_targets_packages.R
+++ b/_targets_packages.R
@@ -1,5 +1,5 @@
 # Generated by targets::tar_renv(): do not edit by hand
-library(bs4Dash)
+library(bslib)
 library(crew)
 library(gt)
 library(markdown)
diff --git a/renv.lock b/renv.lock
index bd053df..15c4f35 100644
--- a/renv.lock
+++ b/renv.lock
@@ -9,13 +9,6 @@
     ]
   },
   "Packages": {
-    "BH": {
-      "Package": "BH",
-      "Version": "1.84.0-0",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Hash": "a8235afbcd6316e6e91433ea47661013"
-    },
     "Matrix": {
       "Package": "Matrix",
       "Version": "1.6-5",
@@ -66,7 +59,7 @@
     },
     "V8": {
       "Package": "V8",
-      "Version": "4.4.2",
+      "Version": "5.0.1",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -75,29 +68,7 @@
         "jsonlite",
         "utils"
       ],
-      "Hash": "ca98390ad1cef2a5a609597b49d3d042"
-    },
-    "anytime": {
-      "Package": "anytime",
-      "Version": "0.3.9",
-      "Source": "Repository",
-      "Repository": "RSPM",
-      "Requirements": [
-        "BH",
-        "R",
-        "Rcpp"
-      ],
-      "Hash": "74a64813f17b492da9c6afda6b128e3d"
-    },
-    "askpass": {
-      "Package": "askpass",
-      "Version": "1.2.0",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "sys"
-      ],
-      "Hash": "cad6cf7f1d5f6e906700b9d3e718c796"
+      "Hash": "7f3867df00a91c63089beb85b9ef0208"
     },
     "backports": {
       "Package": "backports",
@@ -141,32 +112,14 @@
     },
     "bitops": {
       "Package": "bitops",
-      "Version": "1.0-7",
+      "Version": "1.0-8",
       "Source": "Repository",
       "Repository": "CRAN",
-      "Hash": "b7d8d8ee39869c18d8846a184dd8a1af"
-    },
-    "bs4Dash": {
-      "Package": "bs4Dash",
-      "Version": "2.3.3",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "bslib",
-        "fresh",
-        "htmltools",
-        "httpuv",
-        "httr",
-        "jsonlite",
-        "lifecycle",
-        "shiny",
-        "waiter"
-      ],
-      "Hash": "9d3c4c0f9022322dbad0b3a68b86e81b"
+      "Hash": "da69e6b6f8feebec0827205aad3fdbd8"
     },
     "bslib": {
       "Package": "bslib",
-      "Version": "0.7.0",
+      "Version": "0.8.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -184,18 +137,18 @@
         "rlang",
         "sass"
       ],
-      "Hash": "8644cc53f43828f19133548195d7e59e"
+      "Hash": "b299c6741ca9746fb227debcb0f9fb6c"
     },
     "cachem": {
       "Package": "cachem",
-      "Version": "1.0.8",
+      "Version": "1.1.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "fastmap",
         "rlang"
       ],
-      "Hash": "c35768291560ce302c0a6589f92e837d"
+      "Hash": "cd9a672193789068eb5a2aad65a0dedf"
     },
     "callr": {
       "Package": "callr",
@@ -233,7 +186,7 @@
     },
     "colorspace": {
       "Package": "colorspace",
-      "Version": "2.1-0",
+      "Version": "2.1-1",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -243,7 +196,7 @@
         "methods",
         "stats"
       ],
-      "Hash": "f20c47fd52fae58b4e377c37bb8c335b"
+      "Hash": "d954cb1c57e8d8b756165d7ba18aa55a"
     },
     "commonmark": {
       "Package": "commonmark",
@@ -264,7 +217,7 @@
     },
     "crayon": {
       "Package": "crayon",
-      "Version": "1.5.2",
+      "Version": "1.5.3",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -272,7 +225,7 @@
         "methods",
         "utils"
       ],
-      "Hash": "e8a1e41acf02548751f45c718d55aa6a"
+      "Hash": "859d96e65ef198fd43e82b9628d593ef"
     },
     "crew": {
       "Package": "crew",
@@ -321,13 +274,13 @@
     },
     "curl": {
       "Package": "curl",
-      "Version": "5.2.1",
+      "Version": "5.2.3",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "R"
       ],
-      "Hash": "411ca2c03b1ce5f548345d2fc2685f7a"
+      "Hash": "d91263322a58af798f6cf3b13fd56dde"
     },
     "data.table": {
       "Package": "data.table",
@@ -342,14 +295,14 @@
     },
     "digest": {
       "Package": "digest",
-      "Version": "0.6.35",
+      "Version": "0.6.37",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "R",
         "utils"
       ],
-      "Hash": "698ece7ba5a4fa4559e3d537e7ec3d31"
+      "Hash": "33698c4b3127fc9f506654607fb73676"
     },
     "dplyr": {
       "Package": "dplyr",
@@ -374,27 +327,15 @@
       ],
       "Hash": "fedd9d00c2944ff00a0e2696ccf048ec"
     },
-    "ellipsis": {
-      "Package": "ellipsis",
-      "Version": "0.3.2",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "R",
-        "rlang"
-      ],
-      "Hash": "bb0eec2fe32e88d9e2836c2f73ea2077"
-    },
     "evaluate": {
       "Package": "evaluate",
-      "Version": "0.24.0",
+      "Version": "1.0.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
-        "R",
-        "methods"
+        "R"
       ],
-      "Hash": "a1066cbc05caee9a4bf6d90f194ff4da"
+      "Hash": "6b567375113ceb7d9f800de4dd42218e"
     },
     "fansi": {
       "Package": "fansi",
@@ -410,10 +351,10 @@
     },
     "farver": {
       "Package": "farver",
-      "Version": "2.1.1",
+      "Version": "2.1.2",
       "Source": "Repository",
       "Repository": "CRAN",
-      "Hash": "8106d78941f34855c440ddb946b8f7a5"
+      "Hash": "680887028577f3fa2a81e410ed0d6e42"
     },
     "fastmap": {
       "Package": "fastmap",
@@ -434,19 +375,6 @@
       ],
       "Hash": "c2efdd5f0bcd1ea861c2d4e2a883a67d"
     },
-    "fresh": {
-      "Package": "fresh",
-      "Version": "0.2.0",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "htmltools",
-        "rstudioapi",
-        "sass",
-        "shiny"
-      ],
-      "Hash": "fa54367040deb4537da49b7ac0ee5770"
-    },
     "fs": {
       "Package": "fs",
       "Version": "1.6.4",
@@ -481,18 +409,18 @@
     },
     "glue": {
       "Package": "glue",
-      "Version": "1.7.0",
+      "Version": "1.8.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "R",
         "methods"
       ],
-      "Hash": "e0b3a53876554bd45879e596cdb10a52"
+      "Hash": "5899f1eaa825580172bb56c08266f37c"
     },
     "gt": {
       "Package": "gt",
-      "Version": "0.10.1",
+      "Version": "0.11.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -518,7 +446,7 @@
         "vctrs",
         "xml2"
       ],
-      "Hash": "03009c105dfae79460b8eb9d8cf791e4"
+      "Hash": "3470c2eb1123db6a2c54ec812de38284"
     },
     "highr": {
       "Package": "highr",
@@ -577,21 +505,6 @@
       ],
       "Hash": "d55aa087c47a63ead0f6fc10f8fa1ee0"
     },
-    "httr": {
-      "Package": "httr",
-      "Version": "1.4.7",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "R",
-        "R6",
-        "curl",
-        "jsonlite",
-        "mime",
-        "openssl"
-      ],
-      "Hash": "ac107251d9d9fd72f0ca8049988f1d7f"
-    },
     "igraph": {
       "Package": "igraph",
       "Version": "2.0.3",
@@ -627,13 +540,13 @@
     },
     "jsonlite": {
       "Package": "jsonlite",
-      "Version": "1.8.8",
+      "Version": "1.8.9",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "methods"
       ],
-      "Hash": "e1b9c55281c5adc4dd113652d9e26768"
+      "Hash": "4e993b65c2c3ffbffce7bb3e2c6f832b"
     },
     "juicyjuice": {
       "Package": "juicyjuice",
@@ -723,7 +636,7 @@
     },
     "markdown": {
       "Package": "markdown",
-      "Version": "1.12",
+      "Version": "1.13",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -732,7 +645,7 @@
         "utils",
         "xfun"
       ],
-      "Hash": "765cf53992401b3b6c297b69e1edb8bd"
+      "Hash": "074efab766a9d6360865ad39512f2a7e"
     },
     "memoise": {
       "Package": "memoise",
@@ -787,16 +700,6 @@
       ],
       "Hash": "c601dd0bd16c37df416cab6c47512815"
     },
-    "openssl": {
-      "Package": "openssl",
-      "Version": "2.2.0",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "askpass"
-      ],
-      "Hash": "2bcca3848e4734eb3b16103bc9aa4b8e"
-    },
     "pillar": {
       "Package": "pillar",
       "Version": "1.9.0",
@@ -867,14 +770,14 @@
     },
     "ps": {
       "Package": "ps",
-      "Version": "1.7.7",
+      "Version": "1.8.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "R",
         "utils"
       ],
-      "Hash": "878b467580097e9c383acbb16adab57a"
+      "Hash": "4b9c8485b0c7eecdf0a9ba5132a45576"
     },
     "rappdirs": {
       "Package": "rappdirs",
@@ -888,13 +791,13 @@
     },
     "reactR": {
       "Package": "reactR",
-      "Version": "0.5.0",
+      "Version": "0.6.1",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "htmltools"
       ],
-      "Hash": "c9014fd1a435b2d790dd506589cb24e5"
+      "Hash": "b8e3d93f508045812f47136c7c44c251"
     },
     "reactable": {
       "Package": "reactable",
@@ -913,13 +816,13 @@
     },
     "renv": {
       "Package": "renv",
-      "Version": "1.0.7",
+      "Version": "1.0.9",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "utils"
       ],
-      "Hash": "397b7b2a265bc5a7a06852524dabae20"
+      "Hash": "ef233f0e9064fc88c898b340c9add5c2"
     },
     "rlang": {
       "Package": "rlang",
@@ -934,7 +837,7 @@
     },
     "rmarkdown": {
       "Package": "rmarkdown",
-      "Version": "2.26",
+      "Version": "2.28",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -953,14 +856,14 @@
         "xfun",
         "yaml"
       ],
-      "Hash": "9b148e7f95d33aac01f31282d49e4f44"
+      "Hash": "062470668513dcda416927085ee9bdc7"
     },
     "rstudioapi": {
       "Package": "rstudioapi",
-      "Version": "0.15.0",
+      "Version": "0.16.0",
       "Source": "Repository",
       "Repository": "CRAN",
-      "Hash": "5564500e25cffad9e22244ced1379887"
+      "Hash": "96710351d642b70e8f02ddeb237c46a7"
     },
     "sass": {
       "Package": "sass",
@@ -1008,7 +911,7 @@
     },
     "shiny": {
       "Package": "shiny",
-      "Version": "1.8.0",
+      "Version": "1.9.1",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -1018,7 +921,6 @@
         "cachem",
         "commonmark",
         "crayon",
-        "ellipsis",
         "fastmap",
         "fontawesome",
         "glue",
@@ -1038,16 +940,15 @@
         "withr",
         "xtable"
       ],
-      "Hash": "3a1f41807d648a908e3c7f0334bf85e6"
+      "Hash": "6a293995a66e12c48d13aa1f957d09c7"
     },
     "shinyWidgets": {
       "Package": "shinyWidgets",
-      "Version": "0.8.1",
+      "Version": "0.8.7",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "R",
-        "anytime",
         "bslib",
         "grDevices",
         "htmltools",
@@ -1056,7 +957,7 @@
         "sass",
         "shiny"
       ],
-      "Hash": "96bb249d21b7473dbeb0311702ef5288"
+      "Hash": "fd8239886f70daa85c36596214958451"
     },
     "shinybusy": {
       "Package": "shinybusy",
@@ -1081,16 +982,9 @@
       ],
       "Hash": "5f5a7629f956619d519205ec475fe647"
     },
-    "sys": {
-      "Package": "sys",
-      "Version": "3.4.2",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Hash": "3a1be13d68d47a8cd0bfd74739ca1555"
-    },
     "tarchetypes": {
       "Package": "tarchetypes",
-      "Version": "0.9.0",
+      "Version": "0.10.0",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -1107,7 +1001,7 @@
         "vctrs",
         "withr"
       ],
-      "Hash": "094a74cdaa048b727d52aebf4c80ed7a"
+      "Hash": "554afb784cbe615ae628dfed026cf77f"
     },
     "targets": {
       "Package": "targets",
@@ -1174,13 +1068,13 @@
     },
     "tinytex": {
       "Package": "tinytex",
-      "Version": "0.50",
+      "Version": "0.53",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
         "xfun"
       ],
-      "Hash": "be7a76845222ad20adb761f462eed3ea"
+      "Hash": "9db859e8aabbb474293dde3097839420"
     },
     "utf8": {
       "Package": "utf8",
@@ -1234,18 +1128,6 @@
       ],
       "Hash": "3e48b097e8d9a91ecced2ed4817a678d"
     },
-    "waiter": {
-      "Package": "waiter",
-      "Version": "0.2.5",
-      "Source": "Repository",
-      "Repository": "CRAN",
-      "Requirements": [
-        "R6",
-        "htmltools",
-        "shiny"
-      ],
-      "Hash": "93e6b6c8ae3f81d4be77a0dc74e5cf5e"
-    },
     "withr": {
       "Package": "withr",
       "Version": "3.0.1",
diff --git a/renv/activate.R b/renv/activate.R
index d13f993..c360bf2 100644
--- a/renv/activate.R
+++ b/renv/activate.R
@@ -2,7 +2,7 @@
 local({
 
   # the requested version of renv
-  version <- "1.0.7"
+  version <- "1.0.9"
   attr(version, "sha") <- NULL
 
   # the project directory
@@ -98,6 +98,66 @@ local({
     unloadNamespace("renv")
 
   # load bootstrap tools   
+  ansify <- function(text) {
+    if (renv_ansify_enabled())
+      renv_ansify_enhanced(text)
+    else
+      renv_ansify_default(text)
+  }
+  
+  renv_ansify_enabled <- function() {
+  
+    override <- Sys.getenv("RENV_ANSIFY_ENABLED", unset = NA)
+    if (!is.na(override))
+      return(as.logical(override))
+  
+    pane <- Sys.getenv("RSTUDIO_CHILD_PROCESS_PANE", unset = NA)
+    if (identical(pane, "build"))
+      return(FALSE)
+  
+    testthat <- Sys.getenv("TESTTHAT", unset = "false")
+    if (tolower(testthat) %in% "true")
+      return(FALSE)
+  
+    iderun <- Sys.getenv("R_CLI_HAS_HYPERLINK_IDE_RUN", unset = "false")
+    if (tolower(iderun) %in% "false")
+      return(FALSE)
+  
+    TRUE
+  
+  }
+  
+  renv_ansify_default <- function(text) {
+    text
+  }
+  
+  renv_ansify_enhanced <- function(text) {
+  
+    # R help links
+    pattern <- "`\\?(renv::(?:[^`])+)`"
+    replacement <- "`\033]8;;ide:help:\\1\a?\\1\033]8;;\a`"
+    text <- gsub(pattern, replacement, text, perl = TRUE)
+  
+    # runnable code
+    pattern <- "`(renv::(?:[^`])+)`"
+    replacement <- "`\033]8;;ide:run:\\1\a\\1\033]8;;\a`"
+    text <- gsub(pattern, replacement, text, perl = TRUE)
+  
+    # return ansified text
+    text
+  
+  }
+  
+  renv_ansify_init <- function() {
+  
+    envir <- renv_envir_self()
+    if (renv_ansify_enabled())
+      assign("ansify", renv_ansify_enhanced, envir = envir)
+    else
+      assign("ansify", renv_ansify_default, envir = envir)
+  
+  }
+  
   `%||%` <- function(x, y) {
     if (is.null(x)) y else x
   }
@@ -142,7 +202,10 @@ local({
     # compute common indent
     indent <- regexpr("[^[:space:]]", lines)
     common <- min(setdiff(indent, -1L)) - leave
-    paste(substring(lines, common), collapse = "\n")
+    text <- paste(substring(lines, common), collapse = "\n")
+  
+    # substitute in ANSI links for executable renv code
+    ansify(text)
   
   }
   
@@ -306,7 +369,11 @@ local({
     )
   
     if ("headers" %in% names(formals(utils::download.file)))
-      args$headers <- renv_bootstrap_download_custom_headers(url)
+    {
+      headers <- renv_bootstrap_download_custom_headers(url)
+      if (length(headers) && is.character(headers))
+        args$headers <- headers
+    }
   
     do.call(utils::download.file, args)
   
@@ -385,10 +452,22 @@ local({
     for (type in types) {
       for (repos in renv_bootstrap_repos()) {
   
+        # build arguments for utils::available.packages() call
+        args <- list(type = type, repos = repos)
+  
+        # add custom headers if available -- note that
+        # utils::available.packages() will pass this to download.file()
+        if ("headers" %in% names(formals(utils::download.file)))
+        {
+          headers <- renv_bootstrap_download_custom_headers(url)
+          if (length(headers) && is.character(headers))
+            args$headers <- headers
+        }
+  
         # retrieve package database
         db <- tryCatch(
           as.data.frame(
-            utils::available.packages(type = type, repos = repos),
+            do.call(utils::available.packages, args),
             stringsAsFactors = FALSE
           ),
           error = identity
@@ -470,6 +549,14 @@ local({
   
   }
   
+  renv_bootstrap_github_token <- function() {
+    for (envvar in c("GITHUB_TOKEN", "GITHUB_PAT", "GH_TOKEN")) {
+      envval <- Sys.getenv(envvar, unset = NA)
+      if (!is.na(envval))
+        return(envval)
+    }
+  }
+  
   renv_bootstrap_download_github <- function(version) {
   
     enabled <- Sys.getenv("RENV_BOOTSTRAP_FROM_GITHUB", unset = "TRUE")
@@ -477,16 +564,16 @@ local({
       return(FALSE)
   
     # prepare download options
-    pat <- Sys.getenv("GITHUB_PAT")
-    if (nzchar(Sys.which("curl")) && nzchar(pat)) {
+    token <- renv_bootstrap_github_token()
+    if (nzchar(Sys.which("curl")) && nzchar(token)) {
       fmt <- "--location --fail --header \"Authorization: token %s\""
-      extra <- sprintf(fmt, pat)
+      extra <- sprintf(fmt, token)
       saved <- options("download.file.method", "download.file.extra")
       options(download.file.method = "curl", download.file.extra = extra)
       on.exit(do.call(base::options, saved), add = TRUE)
-    } else if (nzchar(Sys.which("wget")) && nzchar(pat)) {
+    } else if (nzchar(Sys.which("wget")) && nzchar(token)) {
       fmt <- "--header=\"Authorization: token %s\""
-      extra <- sprintf(fmt, pat)
+      extra <- sprintf(fmt, token)
       saved <- options("download.file.method", "download.file.extra")
       options(download.file.method = "wget", download.file.extra = extra)
       on.exit(do.call(base::options, saved), add = TRUE)