diff --git a/.github/workflows/lint.yml b/.github/workflows/lint.yml index b4f11959..e168385d 100644 --- a/.github/workflows/lint.yml +++ b/.github/workflows/lint.yml @@ -17,7 +17,7 @@ jobs: timeout-minutes: 5 steps: - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2 - - uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0 + - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0 with: python-version: "3.9" - uses: pre-commit/action@2c7b3805fd2a0fd8c1884dcaebf91fc102a13ecd # v3.0.1 diff --git a/ARCHIVE/README.md b/ARCHIVE/README.md index 9e839ab2..f343578e 100644 --- a/ARCHIVE/README.md +++ b/ARCHIVE/README.md @@ -19,6 +19,7 @@ the archive are as follows | Date | Extension Name | Deprecation reason | |------------|-------------------------------|---------------------| +| 2025-04-02 | SlicerWMA | Extension prevented Slicer from starting https://discourse.slicer.org/t/slicer-doesnt-open-after-installing-slicerwma-extension/42356| | 2024-11-16 | SlicerOpenCV | Extension failing build and no longer needed https://discourse.slicer.org/t/opencv-extension-build-fails-since-june-itk-upgrade/38158/2 | | 2024-06-14 | iGyne | Unmaintained and incompatible with Slicer >- 5.2 due to its dependencies to the Annotations module. | | 2023-08-11 | mpReview | The extension is available again (it has been updated to use Segment Editor module instead of the removed Editor module). | diff --git a/SlicerWMA.json b/ARCHIVE/SlicerWMA.json similarity index 100% rename from SlicerWMA.json rename to ARCHIVE/SlicerWMA.json diff --git a/SlicerDTIALPS.json b/DTI-ALPS.json similarity index 100% rename from SlicerDTIALPS.json rename to DTI-ALPS.json diff --git a/DenseCorrespondenceAnalysis.json b/DenseCorrespondenceAnalysis.json new file mode 100644 index 00000000..e550189e --- /dev/null +++ b/DenseCorrespondenceAnalysis.json @@ -0,0 +1,9 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.1.json#", + "build_dependencies": [], + "build_subdirectory": ".", + "category": "SlicerMorph", + "scm_revision": "main", + "scm_url": "https://github.com/SlicerMorph/SlicerDenseCorrespondenceAnalysis.git", + "tier": 3 +} diff --git a/MHubRunner.json b/MHubRunner.json index 5cfc631d..b58eccbc 100644 --- a/MHubRunner.json +++ b/MHubRunner.json @@ -1,9 +1,9 @@ { "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.1.json#", - "build_dependencies": [], + "build_dependencies": ["QuantitativeReporting"], "build_subdirectory": ".", "category": "Examples", "scm_revision": "main", - "scm_url": "https://github.com/MHubAI/SlicerMRunner", + "scm_url": "https://github.com/LennyN95/SlicerMHubRunner", "tier": 3 } diff --git a/MorphoDepot.json b/MorphoDepot.json index 467a11a2..32fe7cc1 100644 --- a/MorphoDepot.json +++ b/MorphoDepot.json @@ -4,6 +4,6 @@ "build_subdirectory": ".", "category": "SlicerMorph", "scm_revision": "main", - "scm_url": "https://github.com/pieper/SlicerMorphoDepot.git", + "scm_url": "https://github.com/MorphoCloud/SlicerMorphoDepot.git", "tier": 1 } diff --git a/NNInteractive.json b/NNInteractive.json new file mode 100644 index 00000000..34aaff59 --- /dev/null +++ b/NNInteractive.json @@ -0,0 +1,9 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.1.json#", + "build_dependencies": [], + "build_subdirectory": ".", + "category": "Segmentation", + "scm_revision": "main", + "scm_url": "https://github.com/coendevente/SlicerNNInteractive.git", + "tier": 3 +} diff --git a/Photogrammetry.json b/Photogrammetry.json new file mode 100644 index 00000000..adea676f --- /dev/null +++ b/Photogrammetry.json @@ -0,0 +1,9 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.1.json#", + "build_dependencies": ["PyTorch", "SlicerMorph"], + "build_subdirectory": ".", + "category": "Photogrammetry", + "scm_revision": "master", + "scm_url": "https://github.com/SlicerMorph/SlicerPhotogrammetry.git", + "tier": 1 +} diff --git a/PolycysticKidneySeg.json b/PolycysticKidneySeg.json new file mode 100644 index 00000000..4aa18605 --- /dev/null +++ b/PolycysticKidneySeg.json @@ -0,0 +1,8 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.0.json#", + "build_dependencies": ["PyTorch"], + "build_subdirectory": ".", + "category": "Segmentation", + "scm_revision": "main", + "scm_url": "https://github.com/conze/SlicerPolycysticKidneySeg" +} diff --git a/SPECTRecon.json b/SPECTRecon.json new file mode 100644 index 00000000..b043782b --- /dev/null +++ b/SPECTRecon.json @@ -0,0 +1,8 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.0.json#", + "build_dependencies": [], + "build_subdirectory": ".", + "category": "Tomographic Reconstruction", + "scm_revision": "main", + "scm_url": "https://github.com/PyTomography/SlicerSPECTRecon.git" +} diff --git a/SlicerANTsPy.json b/SlicerANTsPy.json new file mode 100644 index 00000000..72ef77cc --- /dev/null +++ b/SlicerANTsPy.json @@ -0,0 +1,9 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.1.json#", + "build_dependencies": [], + "build_subdirectory": ".", + "category": "Registration", + "scm_revision": "main", + "scm_url": "https://github.com/SlicerMorph/SlicerANTsPy.git", + "tier": 3 +} diff --git a/SlicerNeuro.json b/SlicerNeuro.json index 06eed658..24b42331 100644 --- a/SlicerNeuro.json +++ b/SlicerNeuro.json @@ -6,8 +6,7 @@ "SlicerFreeSurfer", "SlicerDcm2nii", "SlicerDMRI", - "HDBrainExtraction", - "SlicerWMA" + "HDBrainExtraction" ], "build_subdirectory": ".", "category": "Neuroimaging", diff --git a/SlicerSPECTRecon.json b/SlicerSPECTRecon.json new file mode 100644 index 00000000..46942fb6 --- /dev/null +++ b/SlicerSPECTRecon.json @@ -0,0 +1,9 @@ +{ + "$schema": "https://raw.githubusercontent.com/Slicer/Slicer/main/Schemas/slicer-extension-catalog-entry-schema-v1.0.0.json#", + "build_dependencies": [], + "build_subdirectory": ".", + "category": "Tomographic Reconstruction", + "scm_revision": "main", + "scm_url": "https://github.com/PyTomography/slicer_spect_recon.git", + "tier": 3 +}