Initialization of recovered compartment fix in ODE SECIR model

[HenrZu]

Bug description

When setting the recovered compartment with real world data, we use the confirmed cases.

However, is should be equal to the secirvvs model

memilio/cpp/models/ode_secirvvs/parameters_io.cpp

Line 154 in b1843bf

num_rec[i] -= num_InfectedSymptoms[i] / scaling_factor_inf[i];

So, we should take the commulative number of reported infections at t_0 (already in the code) and subtract all compartments except Susceptible in the same region/age group as explained in https://doi.org/10.1371/journal.pcbi.1010054.s002 in Eq.12.

Version

Linux

To reproduce

check the set_cases functionality.

Relevant log output

Add any relevant information, e.g. used compiler, screenshots.

Checklist

• Attached labels, especially loc:: or model:: labels.
• Linked to project