pubs

Author: rgs2151

_data/papers.yml

@@ -1,15 +1,129 @@
+- year: 2025
+  title: "Learning and language in the unconscious human hippocampus."
+  authors: "Katlowitz KA, ..., Rungratsameetaweemana N, Hayden BY∗, Sheth SA∗"
+  venue: "bioRxiv: 10.1101/2025.04.09.648012, Submitted."
+  pdf: "/assets/papers/Katlowitz_2025.pdf"
+  bib: "/assets/bibs/Katlowitz_2025.txt"
+  doi: "https://doi.org/10.1101/2025.04.09.648012"
+
+- year: 2025
+  title: "Behavioral investigation of allo-centric and egocentric cognitive maps in human spatial memory"
+  authors: "Nett L, Guth TA, Buechel PK, Rungratsameetaweemana N, Kunz L. "
+  venue: "bioRxiv: 10.1101/2025.01.17.633375, Under review."
+  pdf: "/assets/papers/Nett_2025.pdf"
+  bib: "/assets/bibs/Nett_2025.txt"
+  doi: "https://doi.org/10.1101/2025.01.17.633375"
+
 - year: 2025
   title: "Dynamic categorization rules alter representations in human visual cortex"
   authors: "Henderson MM, Serences, JT, Rungratsameetaweemana N."
-  venue: "bioRxiv: 10.1101/2023.09.11.557257, 2023. In revision."
+  venue: "Nature Communications"
   pdf: "/assets/papers/Henderson_2023.pdf"
   bib: "/assets/bibs/Henderson_2023.txt"
-  doi: "10.1101/2023.09.11.557257"
+  doi: "https://doi.org/10.1038/s41467-025-58707-4"
 
-- year: 2025
+- year: 2025 
+  title: "Random noise promotes slow heterogeneous synaptic dynamics important for robust working memory computation"
+  authors: "Rungratsameetaweemana N*, Kim R*, Chotibut T, Sejnowski TJ."
+  venue: "The Proceedings of the National Academy of Sciences"
+  pdf: "/assets/papers/Nuttida_2023.pdf"
+  bib: "/assets/bibs/Nuttida_2023.txt"
+  doi: "https://doi.org/10.1073/pnas.2316745122"
+
+
+- year: 2024
   title: "Disinhibitory signaling enables flexible coding of top-down information"
   authors: "Aquino TG*, Kim R*, Rungratsameetaweemana N."
-  venue: "bioRxiv: 10.1101/2023.10.17.562828v2, 2023. Under Review."
+  venue: "bioRxiv: 10.1101/2023.10.17.562828, 2024. Submitted."
   pdf: "/assets/papers/Aquino_2023.pdf"
   bib: "/assets/bibs/Aquino_2023.txt"
-  doi: "https://doi.org/10.1101/2023.10.17.562828"
+  doi: "https://doi.org/10.1101/2023.10.17.562828"
+
+
+- year: 2022
+  title: "Brain network dynamics codify heterogeneity in seizure evolution"
+  authors: "Rungratsameetaweemana N, Lainscsek C, Cash SS, Garcia JO, Sejnowski TJ*, Bansal K*.""
+  venue: "Brain Communications"
+  pdf: "/assets/papers/Nuttida_2022.pdf"
+  bib: "/assets/bibs/Nuttida_2022.txt"
+  doi: "https://doi.org/10.1093/braincomms/fcac234"
+
+- year: 2022
+  title: "Intermittent brain network reconfigurations and the resistance to social media influence"
+  authors: "Pinto ILD, Rungratsameetaweemana N, Flaherty K, Periyannan A, Meghdadi A, Richard C, Berka C, Bansal K, Garcia JO."
+  venue: "Network Neuroscience"
+  pdf: "/assets/papers/Pinto_2022.pdf"
+  bib: "/assets/bibs/Pinto_2022.txt"
+  doi: "https://doi.org/10.1162/netn_a_00255"
+
+- year: 2021
+  title: "Understanding motor abnormalities in psychiatric disorders as alteredsensorimotor processing."
+  authors: "Rungratsameetaweemana N."
+  venue: "Biological Psychiatry: Global Open Science"
+  pdf: "/assets/papers/Nuttida_2021.pdf"
+  bib: "/assets/bibs/Nuttida_2021.txt"
+  doi: "https://doi.org/10.1016/j.bpsgos.2021.06.006"
+
+- year: 2021
+  title: "Experimentally testable whole brain manifolds that recapitulate behavior"
+  authors: "Pao G, Smoth C, Park J, Takahashi K, Watanakeesuntorn W, Natsukawa H, Chalasani SH, Lorimer T, Takano R, Rungratsameetaweemana N, Sugihara G. "
+  venue: "arXiv:2106.10627"
+  pdf: "/assets/papers/Pao_2021.pdf"
+  bib: "/assets/bibs/Pao_2021.txt"
+  doi: "https://doi.org/10.48550/arXiv.2106.10627"
+
+- year: 2019
+  title: "Cortical chimera states predict epileptic seizures"
+  authors: "Lainscsek C*, Rungratsameetaweemana N*, Cash SS, Sejnowski TJ."
+  venue: "Chaos: An Interdisciplinary Journal of Nonlinear Science"
+  pdf: "/assets/papers/Lainscsek_2019.pdf"
+  bib: "/assets/bibs/Lainscsek_2019.txt"
+  doi: "https://doi.org/10.1063/1.5139654"
+
+- year: 2019
+  title: "Preserved capacity for learning statistical regularities and directing selective attention after hippocampal lesions"
+  authors: "Rungratsameetaweemana N, Squire LR, Serences JT."
+  venue: "The Proceedings of the National Academy of Sciences"
+  pdf: "/assets/papers/Nuttida_2019.pdf"
+  bib: "/assets/bibs/Nuttida_2019.txt"
+  doi: "https://doi.org/10.1073/pnas.1904502116"
+
+- year: 2019
+  title: "Dissociating the impact of attention and expectation on early sensory processing"
+  authors: "Rungratsameetaweemana N, Serences JT."
+  venue: "Current Opinion in Psychology"
+  pdf: "/assets/papers/Nuttida_Serences_2019.pdf"
+  bib: "/assets/bibs/Nuttida_Serences_2019.txt"
+  doi: "https://doi.org/10.1016/j.copsyc.2019.03.014"
+
+- year: 2018
+  title: "The speed-accuracy tradeoff reveals flexible access to accumulating sensory evidence during human decision-making"
+  authors: "Nelli S, Itthipuripat S, Rungratsameetaweemana N, Serences JT."
+  venue: "bioRxiv: 10.1101/420430v1, 2018"
+  pdf: "/assets/papers/Nelli_2018.pdf"
+  bib: "/assets/bibs/Nelli_2018.txt"
+  doi: ""
+
+- year: 2018
+  title: "Expectations do not alter early sensory processing during perceptual decision-making"
+  authors: "Rungratsameetaweemana N*, Itthipuripat S*, Salazar A, Serences JT."
+  venue: "Journal of Neuroscience"
+  pdf: "/assets/papers/Nuttida_2018.pdf"
+  bib: "/assets/bibs/Nuttida_2018.txt"
+  doi: "https://doi.org/10.1523/JNEUROSCI.3638-17.2018"
+
+- year: 2018
+  title: "Preserved capacity for scene construction and shifts in perspective after hippocampal lesions"
+  authors: "Rungratsameetaweemana N, Squire, LR."
+  venue: "Learning & Memory"
+  pdf: "/assets/papers/Nuttida_Squire_2018.pdf"
+  bib: "/assets/bibs/Nuttida_Squire_2018.txt"
+  doi: "https://doi.org/10.1101/lm.047340.118"
+  
+- year: 2014
+  title: "Changing the spatial scope of attention alters patterns of neural gain in human cortex"
+  authors: "Itthipuripat S, Garcia, JO, Rungratsameetaweemana N, Sprague TC, Serences JT."
+  venue: "Journal of Neuroscience"
+  pdf: "/assets/papers/Itthipuripat_2014.pdf"
+  bib: "/assets/bibs/Itthipuripat_2014.txt"
+  doi: "https://doi.org/10.1523/jneurosci.3943-13.2014"

_includes/papers/papers.html

@@ -1,6 +1,4 @@
-{%- assign papers = site.data.papers
-    | sort: "year"
-    | reverse -%}
+{%- assign papers = site.data.papers -%}
 
 <div class="pub-table-container">
 <table class="pub-table">
@@ -27,19 +25,19 @@
         <div class="pub-links">
           {%- if p.pdf -%}
             <div class="pub-links__item pub-links__item--pdf">
-              [<a href="{{ p.pdf }}">pdf</a>]
+              [<a href="{{ p.pdf }}" target="_blank" rel="noopener noreferrer">pdf</a>]
             </div>
           {%- endif -%}
 
           {%- if p.bib -%}
             <div class="pub-links__item pub-links__item--bib">
-              [<a href="{{ p.bib }}">bib</a>]
+              [<a href="{{ p.bib }}" target="_blank" rel="noopener noreferrer">bib</a>]
             </div>
           {%- endif -%}
 
           {%- if p.doi -%}
             <div class="pub-links__item pub-links__item--doi">
-              [<a href="{{ p.doi }}">doi</a>]
+              [<a href="{{ p.doi }}" target="_blank" rel="noopener noreferrer">doi</a>]
             </div>
           {%- endif -%}
         </div>

assets/bibs/Katlowitz_2025.txt

@@ -0,0 +1,12 @@
+@article {Katlowitz2025.04.09.648012,
+	author = {Katlowitz, Kalman A. and Shah, Shraddha and Franch, Melissa C. and Adkinson, Joshua and Belanger, James L. and Mathura, Raissa K. and Mesz{\'e}na, Domokos and Mickiewicz, Elizabeth A. and McGinley, Matthew and Mu{\~n}oz, William and Banks, Garrett P. and Cash, Sydney S. and Hsu, Chih-Wei and Paulk, Angelique C. and Provenza, Nicole R. and Watrous, Andrew and Williams, Ziv and Heilbronner, Sarah R. and Kim, Robert and Rungratsameetaweemana, Nuttida and Hayden, Benjamin Y. and Sheth, Sameer A.},
+	title = {Learning and language in the unconscious human hippocampus},
+	elocation-id = {2025.04.09.648012},
+	year = {2025},
+	doi = {10.1101/2025.04.09.648012},
+	publisher = {Cold Spring Harbor Laboratory},
+	abstract = {Consciousness is a fundamental component of cognition,1 but the degree to which higher-order perception relies on it remains disputed.2,3 Here we demonstrate the persistence of learning, semantic processing, and online prediction in individuals under general anesthesia-induced loss of consciousness.4,5 Using high-density Neuropixels microelectrodes6 to record neural activity in the human hippocampus while playing a series of tones to anesthetized patients, we found that hippocampal neurons could reliably detect oddball tones. This effect size grew over the course of the experiment (\~{}10 minutes), consistent with learning effects. A biologically plausible recurrent neural network model showed that learning and oddball representation are an emergent property of flexible tone discrimination. Last, when we played language stimuli, single units and ensembles carried information about the semantic and grammatical features of natural speech, even predicting semantic information about upcoming words. Together these results indicate that in the hippocampus, which is anatomically and functionally distant from primary sensory cortices,7 complex processing of sensory stimuli occurs even in the unconscious state.Competing Interest StatementThe authors have declared no competing interest.},
+	URL = {https://www.biorxiv.org/content/early/2025/04/09/2025.04.09.648012},
+	eprint = {https://www.biorxiv.org/content/early/2025/04/09/2025.04.09.648012.full.pdf},
+	journal = {bioRxiv}
+}

assets/bibs/Nett_2025.txt

@@ -0,0 +1,12 @@
+@article {Nett2025.01.17.633375,
+	author = {Nett, Laura and Guth, Tim A. and B{\"u}chel, Philipp K. and Rungratsameetaweemana, Nuttida and Kunz, Lukas},
+	title = {Behavioral investigation of allocentric and egocentric cognitive maps in human spatial memory},
+	elocation-id = {2025.01.17.633375},
+	year = {2025},
+	doi = {10.1101/2025.01.17.633375},
+	publisher = {Cold Spring Harbor Laboratory},
+	abstract = {Spatial memory is a fundamental cognitive function that enables humans and other species to encode and recall the locations of items in their environments. Humans employ diverse strategies to support spatial memory, including the use of cognitive maps. Cognitive maps are mental representations of the environment that organize its content along two or more continuous dimensions. In allocentric cognitive maps, these dimensions form a Cartesian coordinate system referenced to the environment. In egocentric cognitive maps, the dimensions form a polar coordinate system centered on the subject. To better understand how humans employ allocentric and egocentric cognitive maps for spatial memory, we performed a behavioral study with a novel task designed to directly and explicitly assess both types of cognitive maps. During encoding periods, participants navigated through a virtual environment and encountered objects at different locations. During recall periods, participants aimed at remembering these locations in abstract allocentric and egocentric coordinate systems. Our results show that relationships between the objects and the environment, such as their distance to boundaries and corners, were associated with allocentric memory performance. Relationships between the objects and the participant, including their distance and orientation to the participant{\textquoteright}s starting position, were linked to egocentric memory performance. Spatial feedback during recall supported performance within allocentric and egocentric domains, but not across domains. These findings are compatible with the notion that allocentric and egocentric cognitive maps operate as (partially) independent systems for spatial memory, each specialized in processing specific types of spatial relationships.Competing Interest StatementThe authors have declared no competing interest.},
+	URL = {https://www.biorxiv.org/content/early/2025/01/17/2025.01.17.633375},
+	eprint = {https://www.biorxiv.org/content/early/2025/01/17/2025.01.17.633375.full.pdf},
+	journal = {bioRxiv}
+}