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lines changed Original file line number Diff line number Diff line change 4343 # # for testing CDPKit SmallMol
4444 # pip install CDPKit
4545
46- - name : Install blast
47- run : conda install -c bioconda blast -y
46+ - name : Install blast for OPM tests
47+ if : ${{ matrix.os != 'windows-2022' }}
48+ run : conda install -c bioconda blast -y -q
4849
4950 - name : Install moleculekit
5051 run : |
Original file line number Diff line number Diff line change @@ -14,10 +14,8 @@ def _test_align_opm():
1414 mol = Molecule ("7y89" )
1515 res = align_to_opm (mol )
1616 assert len (res ) == 3
17- assert res [0 ]["pdbid" ] == "6DDE"
18- assert res [0 ]["thickness" ] == 31.4
1917 molaln = res [0 ]["hsps" ][0 ]["aligned_mol" ]
20- assert molaln .numAtoms == 8641
18+ assert molaln .coords . shape == ( 8641 , 3 , 1 )
2119
2220
2321@pytest .mark .skipif (
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